HHsearch alignment for GI: 254780711 and conserved domain: COG1110

Probab=97.17  E-value=0.0025  Score=45.66  Aligned_cols=95  Identities=20%  Similarity=0.241  Sum_probs=65.0

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCC-CCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             996234433346889999999986148950782054221004779999851034-7422233210368999999999974
Q gi|254780711|r  103 IMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQ-VDTLEVIPEQSPEKIAIRATQSARD  181 (461)
Q Consensus       103 IllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~-v~~~~~~~~~dp~~i~~~a~~~a~~  181 (461)
T Consensus       100 FaiiAPTGvGKTTfg~~~sl~~a~kgkr~yii~PT~~Lv~Q~~~kl~~~~e~~~~~~~~~~yh~~l~~~ekee~le~i~~  179 (1187)
T COG1110         100 FAIIAPTGVGKTTFGLLMSLYLAKKGKRVYIIVPTTTLVRQVYERLKKFAEDAGSLDVLVVYHSALPTKEKEEALERIES  179 (1187)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHC
T ss_conf             48982788765479999999987558749999667899999999999988653785246653123665779999999865


Q ss_pred             CCCCEEEEECCCCCCCH
Q ss_conf             15886998334422211
Q gi|254780711|r  182 GGYDAVILDTAGRNHIN  198 (461)
Q Consensus       182 ~~~D~iiiDTaGR~~~d  198 (461)
T Consensus       180 gdfdI-litTs~FL~k~  195 (1187)
T COG1110         180 GDFDI-LITTSQFLSKR  195 (1187)
T ss_pred             CCCCE-EEEEHHHHHHH
T ss_conf             99639-99747878866