HHsearch alignment for GI: 254780711 and conserved domain: KOG1532
>KOG1532 consensus.
Probab=97.28 E-value=0.0019 Score=46.45 Aligned_cols=201 Identities=21% Similarity=0.268 Sum_probs=98.1
Q ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC-----CCHHH---------HHHHHHHHCCCCCCCC
Q ss_conf 258841899623443334688999999998614895078205422-----10047---------7999985103474222
Q gi|254780711|r 96 NAPSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVH-----RPAAQ---------EQLRYLGEQIQVDTLE 161 (461)
Q Consensus 96 ~~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~-----R~aA~---------eQL~~~a~~~~v~~~~ 161 (461)
T Consensus 15 ~~~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~-~~ppYviNLDPAv~~vpy~aniDIRDtVkYkEvMkqY~LGPNGgI~- 92 (366)
T KOG1532 15 AIQRPVIILVVGMAGSGKTTFMQRLNSHLHAK-KTPPYVINLDPAVRNVPYPANIDIRDTVKYKEVMKQYQLGPNGGIV- 92 (366)
T ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHC-CCCCEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHH-
T ss_conf 55687079999447788413999999998623-6998088678888548886677566543099999983889986403-
Q ss_pred CCCCCH--HHHH--HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHH
Q ss_conf 332103--6899--999999997415886998334422211246899999985138511000310111225688889887
Q gi|254780711|r 162 VIPEQS--PEKI--AIRATQSARDGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDAVHLARNFD 237 (461)
Q Consensus 162 ~~~~~d--p~~i--~~~a~~~a~~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a~~~a~~F~ 237 (461)
T Consensus 93 --TsLNLF~tk~dqv~~~iek~-~~~~~~~liDTPGQI--------------------E-~FtWSAs-G---sIIte~la 144 (366)
T KOG1532 93 --TSLNLFATKFDQVIELIEKR-AEEFDYVLIDTPGQI--------------------E-AFTWSAS-G---SIITETLA 144 (366)
T ss_pred --HHHHHHHHHHHHHHHHHHHH-HCCCCEEEECCCCCE--------------------E-EEEECCC-C---CCHHHHHH
T ss_conf --35899998789999999974-220477997488806--------------------8-9984278-5---01586676
Q ss_pred HHCCCCCEEEEECCCCCCCC---------HHHHHHHHHCCCHHHEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 63584407764115766330---------367778884787302615867232100136889987735862788999874
Q gi|254780711|r 238 KIVDLTGIILTRMDGDGRGG---------AALSMRTVTGKPIKAIGTGEKINDLENFFPDRIANRILGMGDVVSLVEKAA 308 (461)
Q Consensus 238 ~~~~i~giIlTKlD~~akgG---------~als~~~~~~~PI~fig~GE~~~dle~F~p~~~~~riLGmgD~~~l~e~~~ 308 (461)
T Consensus 145 ss~p--tvv~YvvDt~rs~~p~tFMSNMlYAcSilyktklp~ivvfNK~Dv~d~------~fa~------eWm~DfE~Fq 210 (366)
T KOG1532 145 SSFP--TVVVYVVDTPRSTSPTTFMSNMLYACSILYKTKLPFIVVFNKTDVSDS------EFAL------EWMTDFEAFQ 210 (366)
T ss_pred HCCC--EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC------HHHH------HHHHHHHHHH
T ss_conf 1398--599999447767884169988999999998626876999714344561------8899------9999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 21126789988865310463799999999998
Q gi|254780711|r 309 RNLNEKQAALTAKKIAKGKFDLEDLAEQFRQT 340 (461)
Q Consensus 309 ~~~d~~~~~~l~~k~~~g~F~l~Df~~Ql~~i 340 (461)
T Consensus 211 eAl~~~~~~y~s~l~~SmSL~leeFY~~lrtv 242 (366)
T KOG1532 211 EALNEAESSYMSNLTRSMSLMLEEFYRSLRTV 242 (366)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEE
T ss_conf 99976303266776654798999998317557