HHsearch alignment for GI: 254780711 and conserved domain: KOG2004
>KOG2004 consensus.
Probab=95.70 E-value=0.18 Score=31.49 Aligned_cols=75 Identities=20% Similarity=0.299 Sum_probs=38.1
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 41899623443334688999999998614895078205422100477999985103474222332103689999999999
Q gi|254780711|r 100 PLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSA 179 (461)
Q Consensus 100 p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~a 179 (461)
T Consensus 438 GkIlCf~GPPGVGKTSI~kSIA~AL-nRkFfRfSvGG-------~tDvAeIkGHR------RTYVGAMPGkiI-q~LK~v 502 (906)
T KOG2004 438 GKILCFVGPPGVGKTSIAKSIARAL-NRKFFRFSVGG-------MTDVAEIKGHR------RTYVGAMPGKII-QCLKKV 502 (906)
T ss_pred CCEEEEECCCCCCCCCHHHHHHHHH-CCCEEEEECCC-------CCCHHHHCCCC------EEEECCCCHHHH-HHHHHH
T ss_conf 8379986899877321899999984-87469985366-------34277642542------110014884899-999861
Q ss_pred HHCCCCEEEEE
Q ss_conf 74158869983
Q gi|254780711|r 180 RDGGYDAVILD 190 (461)
Q Consensus 180 ~~~~~D~iiiD 190 (461)
T Consensus 503 ~t~N-PliLiD 512 (906)
T KOG2004 503 KTEN-PLILID 512 (906)
T ss_pred CCCC-CEEEEE
T ss_conf 7788-658853