HHsearch alignment for GI: 254780711 and conserved domain: KOG2878

Probab=97.54  E-value=0.00065  Score=50.06  Aligned_cols=80  Identities=24%  Similarity=0.196  Sum_probs=55.0

Q ss_pred             HHHHHHHHHCCCCCC-CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH--CCCCEEEECCCCCCCHHHHHHHHHHHC
Q ss_conf             999999871877421-00025884189962344333468899999999861--489507820542210047799998510
Q gi|254780711|r   78 VHDELVEVLGKESIE-LDLNAPSPLVIMLVGLQGSGKTTTTAKIAYHLKTL--KKKKILMASLDVHRPAAQEQLRYLGEQ  154 (461)
Q Consensus        78 v~~eL~~lLg~~~~~-l~~~~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~--~~~kV~lv~~Dt~R~aA~eQL~~~a~~  154 (461)
T Consensus         8 ~id~~~~fl~kyiP~~f~~G~~~Pl~igfSgPQGsGKstl~~ald~~lt~Ky~~E~s~~~~SvDDFYLThe~Q~eL~k~n   87 (282)
T KOG2878           8 TIDQKARFLHKYIPVFFKDGDDVPLVIGFSGPQGSGKSTLVFALDYKLTKKYIQEYSSATISVDDFYLTHEGQAELRKKN   87 (282)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHCCCCCEEEEEECCEEEECHHHHHHHHHC
T ss_conf             37889988886375325678867679993378888830431456789999853644148997210366025578887509


Q ss_pred             CCC
Q ss_conf             347
Q gi|254780711|r  155 IQV  157 (461)
Q Consensus       155 ~~v  157 (461)
T Consensus        88 pnN   90 (282)
T KOG2878          88 PNN   90 (282)
T ss_pred             CCC
T ss_conf             998