HHsearch alignment for GI: 254780711 and conserved domain: PHA00729

Probab=95.25  E-value=0.046  Score=35.96  Aligned_cols=97  Identities=23%  Similarity=0.203  Sum_probs=56.3

Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHH-HHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             8841899623443334688999999998-614895078205422100477999985103474222332103689999999
Q gi|254780711|r   98 PSPLVIMLVGLQGSGKTTTTAKIAYHLK-TLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRAT  176 (461)
Q Consensus        98 ~~p~vIllvGl~GsGKTTT~aKLA~~~~-~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~  176 (461)
T Consensus        15 ~GF~S~iifGkQG~GKTTYAlKV~~~v~~~l~~---~-~~----~~~aW~~~~n~------~~F~l---~~al~k~~~~~   77 (228)
T PHA00729         15 NGFVSAIIFGKQGTGKTTYALKVARDVFWKLNN---L-LT----KDDAWQYAYNS------YFFEL---PDALEKIQDAI   77 (228)
T ss_pred             CCCEEEEEECCCCCCCEEEHHHHHHHHHHHHCC---C-CC----CCCHHHHHHHH------EEECH---HHHHHHHHHHH
T ss_conf             794699998367788420219999999999648---8-65----43369999876------14258---99999999998


Q ss_pred             HHHHHCCCCEEEEECCCCCCC----HHHHHHHHHHHHHHCC
Q ss_conf             999741588699833442221----1246899999985138
Q gi|254780711|r  177 QSARDGGYDAVILDTAGRNHI----NDSLMQEISEIKSLTN  213 (461)
Q Consensus       177 ~~a~~~~~D~iiiDTaGR~~~----d~~lm~El~~i~~~~~  213 (461)
T Consensus        78 ~--~~~RiP~ii~DDAgiwLskY~w~~~~m~~Fyk~ynliR  116 (228)
T PHA00729         78 D--NDYRIPLLIFDDAGIWLSKYVWYEDYMITFYKIYNLIR  116 (228)
T ss_pred             H--CCCCCCEEEEECCCHHHHHEEEHHHHHHHHHHHHHHHH
T ss_conf             5--37767779982452012410022877688999999999