HHsearch alignment for GI: 254780711 and conserved domain: PRK00652
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed.
Probab=96.23 E-value=0.023 Score=38.19 Aligned_cols=172 Identities=17% Similarity=0.204 Sum_probs=90.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC----------------HHHHHHHHHHHCCCCCCCCCCCCCHHHH
Q ss_conf 344333468899999999861489507820542210----------------0477999985103474222332103689
Q gi|254780711|r 107 GLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRP----------------AAQEQLRYLGEQIQVDTLEVIPEQSPEK 170 (461)
Q Consensus 107 Gl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~----------------aA~eQL~~~a~~~~v~~~~~~~~~dp~~ 170 (461)
T Consensus 58 tvGGtGKTP~v~~la~~l~~-~g~~~~IlSRGYg~~~~~~~~v~~~~~~~~~vGDEpl-lla~~~~~~v~V~~~---R~- 131 (334)
T PRK00652 58 TVGGNGKTPVVIWLAEQLQA-RGVKVGVVSRGYGGKSKGYPLVLPADTTAAEVGDEPV-LIAQRTGAPVAVSPD---RV- 131 (334)
T ss_pred EECCCCHHHHHHHHHHHHHH-CCCCEEEEECCCCCCCCCCEEEECCCCCHHHCCCHHH-HHHHCCCCCEEEECC---HH-
T ss_conf 87887779999999999997-6993678734667656787276179998355186899-985178983999566---89-
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCC--HHHH----HHHHHHHHHCCCCC
Q ss_conf 99999999974158869983344222112468999999851385110003101112--2568----88898876358440
Q gi|254780711|r 171 IAIRATQSARDGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTG--QDAV----HLARNFDKIVDLTG 244 (461)
Q Consensus 171 i~~~a~~~a~~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~G--q~a~----~~a~~F~~~~~i~g 244 (461)
T Consensus 132 ---~~~~~l~~~~~dviIlDDGfQ-h~~-------------l~rdl~Ivlid~~~~fgn~~llP~GpLREp~~~l~rAD~ 194 (334)
T PRK00652 132 ---KAIKALLALGADIIILDDGLQ-HYR-------------LHRDFEIVVVDGQRRFGNGWLLPAGPLREPPSRLKSADA 194 (334)
T ss_pred ---HHHHHHHHCCCCEEEECCCCC-CCC-------------CCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCE
T ss_conf ---999999965999999747665-664-------------468879999747767889867758656589647614689
Q ss_pred EEEEECCCCCCCCHHHHHHHHHCCCHHHEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 77641157663303677788847873026158672321001368899877358627889998742
Q gi|254780711|r 245 IILTRMDGDGRGGAALSMRTVTGKPIKAIGTGEKINDLENFFPDRIANRILGMGDVVSLVEKAAR 309 (461)
Q Consensus 245 iIlTKlD~~akgG~als~~~~~~~PI~fig~GE~~~dle~F~p~~~~~riLGmgD~~~l~e~~~~ 309 (461)
T Consensus 195 ii~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~---~k~-v~afsGIanP~~F~~~L~~ 251 (334)
T PRK00652 195 VIVNGGDAQ-EGEIPMRLAP---GAAVNLRTGESRDVLK---GKR-VVAFAGIGHPPRFFATLRN 251 (334)
T ss_pred EEEECCCCC-CHHHHHHHCC---CCCEECCCCCCCCCCC---CCE-EEEEEECCCHHHHHHHHHH
T ss_conf 999388543-1104555365---6636766655463357---981-8999944886999999997