HHsearch alignment for GI: 254780711 and conserved domain: PRK00741
>PRK00741 prfC peptide chain release factor 3; Provisional.
Probab=96.23 E-value=0.05 Score=35.69 Aligned_cols=152 Identities=18% Similarity=0.224 Sum_probs=78.7
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECC-CCCCCH-----HHHHHHHHHHCCCCCCCCCCCCCHHHHHH
Q ss_conf 841899623443334688999999998614895078205-422100-----47799998510347422233210368999
Q gi|254780711|r 99 SPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASL-DVHRPA-----AQEQLRYLGEQIQVDTLEVIPEQSPEKIA 172 (461)
Q Consensus 99 ~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~-Dt~R~a-----A~eQL~~~a~~~~v~~~~~~~~~dp~~i~ 172 (461)
T Consensus 9 ~~RniaIi~H~dAGKTTLtE~lL~~~Ga--I~~~G~V~~~~~~~~~~sD~~~~E~~R------giSI~ss---------- 70 (526)
T PRK00741 9 KRRTFAIISHPDAGKTTLTEKLLLFGGA--IQEAGTVKGRKSGRHATSDWMEMEKQR------GISVTSS---------- 70 (526)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCC--CCCCCEEECCCCCCCCCCCCCHHHHHC------CCEEECC----------
T ss_conf 1177999937898989999999974675--244846631467886467885889975------9648615----------
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHH--HHCCCCCE-EEEE
Q ss_conf 99999997415886998334422211246899999985138511000310111225688889887--63584407-7641
Q gi|254780711|r 173 IRATQSARDGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDAVHLARNFD--KIVDLTGI-ILTR 249 (461)
Q Consensus 173 ~~a~~~a~~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a~~~a~~F~--~~~~i~gi-IlTK 249 (461)
T Consensus 71 ---v~~~e~~~~~iNliDTPGh~----DF~~e~~raL~a~--D~Av~Vida~~GVe~qT-e~~w~~~~~~~iP~i~FINK 140 (526)
T PRK00741 71 ---VMQFPYRDCLINLLDTPGHE----DFSEDTYRTLTAV--DSALMVIDAAKGVEPQT-RKLMEVCRLRDTPIFTFINK 140 (526)
T ss_pred ---EEEEEECCEEEEEEECCCCH----HHHHHHHHHHHHH--CEEEEEEECCCCCCHHH-HHHHHHHHHCCCCEEEEEEC
T ss_conf ---17786789899999098946----7789999999873--75999997775523336-89999988639988999965
Q ss_pred CCCC-CCCCHHH-HHHHHHCCCHH----HEECCCC
Q ss_conf 1576-6330367-77888478730----2615867
Q gi|254780711|r 250 MDGD-GRGGAAL-SMRTVTGKPIK----AIGTGEK 278 (461)
Q Consensus 250 lD~~-akgG~al-s~~~~~~~PI~----fig~GE~ 278 (461)
T Consensus 141 mDR~~ad~~~~l~ei~~~lg~~~~p~~~Pig~g~~ 175 (526)
T PRK00741 141 LDRDGREPLELLDEIEEVLGIACAPITWPIGMGKR 175 (526)
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 67678987898877888747873688830367886