HHsearch alignment for GI: 254780711 and conserved domain: PRK05291

>PRK05291 trmE tRNA modification GTPase TrmE; Reviewed.
Probab=97.72  E-value=0.00021  Score=53.76  Aligned_cols=163  Identities=20%  Similarity=0.272  Sum_probs=88.9

Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCC
Q ss_conf             99999999871877421000258841899623443334688999999998614895078205422100477999985103
Q gi|254780711|r   76 KIVHDELVEVLGKESIELDLNAPSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQI  155 (461)
Q Consensus        76 kiv~~eL~~lLg~~~~~l~~~~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~  155 (461)
T Consensus       194 ~~l~~~i~~ll~~~~~g~~l~~--G~~v~i~G~PN~GKSSL~N~L~----~---~drAIVS-------------------  245 (445)
T PRK05291        194 EELIAELEKLLASAKQGELLRE--GLKVVIAGRPNVGKSSLLNALL----G---EERAIVT-------------------  245 (445)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHC--CCEEEEECCCCCCHHHHHHHHH----C---CCCEEEC-------------------
T ss_conf             9999999999999874178635--9869988999876899999985----7---8746731-------------------


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHH-HHCCCCEEEEECCCCCCCHHHHHHHH---HHHHHHCCCCCCCCCCCHHCCHHHHH
Q ss_conf             474222332103689999999999-74158869983344222112468999---99985138511000310111225688
Q gi|254780711|r  156 QVDTLEVIPEQSPEKIAIRATQSA-RDGGYDAVILDTAGRNHINDSLMQEI---SEIKSLTNPHEILLVADALTGQDAVH  231 (461)
Q Consensus       156 ~v~~~~~~~~~dp~~i~~~a~~~a-~~~~~D~iiiDTaGR~~~d~~lm~El---~~i~~~~~p~e~~lV~da~~Gq~a~~  231 (461)
T Consensus       246 ~ip------GTT-----RD~ie~~l~l~G~~v~l~DTAGiR~t~-d~IE~~GI~ra~~~~~~ADlil~v~D~s~~~~~~~  313 (445)
T PRK05291        246 DIA------GTT-----RDVIEEHINLDGIPLRLIDTAGIRETE-DEVEKIGIERSRKAIEEADLVLLVLDASEPLTEED  313 (445)
T ss_pred             CCC------CCC-----CCEEEEEEEECCEEEEEEECCCCCCCC-CHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCH
T ss_conf             899------974-----040223689999899999899766557-45889999999999983999999987998887225


Q ss_pred             HHHHHHHHCC--CCCEEEEECCCCCCCCHHHHHHHHHCCCHHHEE--CCCCCCCCCCCCHH
Q ss_conf             8898876358--440776411576633036777888478730261--58672321001368
Q gi|254780711|r  232 LARNFDKIVD--LTGIILTRMDGDGRGGAALSMRTVTGKPIKAIG--TGEKINDLENFFPD  288 (461)
Q Consensus       232 ~a~~F~~~~~--i~giIlTKlD~~akgG~als~~~~~~~PI~fig--~GE~~~dle~F~p~  288 (461)
T Consensus       314 ~--~~~~~~~~~~~i~V~NK~DL~~~--------~~~~~~~i~iSak~g~Gi~~L~~~i~~  364 (445)
T PRK05291        314 K--EILEEFKNKPVIVVLNKADLTGE--------KIDGLPVIRISAKTGEGIDELEEALKQ  364 (445)
T ss_pred             H--HHHHHCCCCCEEEEEEHHHCCCC--------CCCCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf             9--99985179987999851204665--------347897599983788699999999999