HHsearch alignment for GI: 254780711 and conserved domain: PRK05648

>PRK05648 DNA polymerase III subunits gamma and tau; Reviewed.
Probab=97.19  E-value=0.0023  Score=45.86  Aligned_cols=218  Identities=19%  Similarity=0.184  Sum_probs=89.6

Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC-EEEECCCCCCCHHHHHHHHHHHCCCCCCCCC----CCCCHHHHHH
Q ss_conf             8841899623443334688999999998614895-0782054221004779999851034742223----3210368999
Q gi|254780711|r   98 PSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKK-ILMASLDVHRPAAQEQLRYLGEQIQVDTLEV----IPEQSPEKIA  172 (461)
Q Consensus        98 ~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~k-V~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~----~~~~dp~~i~  172 (461)
T Consensus        36 ~~~~a~l~~g~rg~gkt~~ar~~ak~lnc~~~~~~~pc~~c~~--------c~~i~~~~~~d~~e~d~as~~~v~~~r~~  107 (705)
T PRK05648         36 RLHHAYLFTGTRGVGKTTIARIIAKCLNCETGVSSTPCGECSV--------CREIDEGRFVDLIEVDAASRTKVEDTREL  107 (705)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHH--------HHHHHCCCCCCEEEECCCCCCCHHHHHHH
T ss_conf             8630465007898889899999999867789998897877600--------46662489776344515544788999999


Q ss_pred             HHHHHHHH-HCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCC-HH----HHHHHHHHH---------
Q ss_conf             99999997-4158869983344222112468999999851385110003101112-25----688889887---------
Q gi|254780711|r  173 IRATQSAR-DGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTG-QD----AVHLARNFD---------  237 (461)
Q Consensus       173 ~~a~~~a~-~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~G-q~----a~~~a~~F~---------  237 (461)
T Consensus       108 ~~~~~~~p~~~~~kv~~idevhmls~~--~fnallktleep-p~~v~f~~-att~~~k~p~t~~src~~~~~~~~~~~~~  183 (705)
T PRK05648        108 LDNVQYAPTRGRYKVYLIDEVHMLSSH--SFNALLKTLEEP-PPHVKFLL-ATTDPQKLPVTILSRCLQFSLKNMSPERV  183 (705)
T ss_pred             HHHCCCCCCCCCEEEEEEEHHHHCCHH--HHHHHHHHCCCC-CCCEEEEE-ECCCHHHCCHHHHHHHHHCCCCCCCHHHH
T ss_conf             985551776774579998426541799--999998740479-75459998-42873537589997664302368999999


Q ss_pred             ----------HHCCCCCEEEEECCCCCCCC--HHHHHHHHHCCCHHHEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH
Q ss_conf             ----------63584407764115766330--367778884787302615867232100136889987735862788999
Q gi|254780711|r  238 ----------KIVDLTGIILTRMDGDGRGG--AALSMRTVTGKPIKAIGTGEKINDLENFFPDRIANRILGMGDVVSLVE  305 (461)
Q Consensus       238 ----------~~~~i~giIlTKlD~~akgG--~als~~~~~~~PI~fig~GE~~~dle~F~p~~~~~riLGmgD~~~l~e  305 (461)
T Consensus       184 ~~~l~~~~~~e~~~~~~~~~~~~~~~~~g~~rd~ls~~dq---~~~~-~~~-~~~-------~~~v~~mlg~~~~~~~~~  251 (705)
T PRK05648        184 VEHLSHVLGAENVPFEEDALWLLGRAADGSMRDAMSLTDQ---AIAF-GEG-KVL-------AADVRAMLGTLDHGQVYG  251 (705)
T ss_pred             HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH---HHHC-CCC-CCC-------HHHHHHHHCCCCHHHHHH
T ss_conf             9999999997599778999999999748967779999999---9860-688-407-------999999858887789999


Q ss_pred             HHHHHHHHHHHH--HHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             874211267899--8886531046379999999999
Q gi|254780711|r  306 KAARNLNEKQAA--LTAKKIAKGKFDLEDLAEQFRQ  339 (461)
Q Consensus       306 ~~~~~~d~~~~~--~l~~k~~~g~F~l~Df~~Ql~~  339 (461)
T Consensus       252 l~~a~~~~d~~~~~~~~~~~~~~~~~~~~~l~~l~~  287 (705)
T PRK05648        252 VLQALLEGDARALLEAVRHLAEQGPDWNGVLAEMLN  287 (705)
T ss_pred             HHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf             999999568999999999999858899999999999