HHsearch alignment for GI: 254780711 and conserved domain: PRK05703

Probab=100.00  E-value=0  Score=391.74  Aligned_cols=253  Identities=25%  Similarity=0.375  Sum_probs=213.9

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEC
Q ss_conf             99999999999852469699999999999998303111269989999999999999871877421000258841899623
Q gi|254780711|r   28 SNTLREIRRTFLEADVSLEVVQSFSKRVQEKAKGEKILRSIQPGQMVIKIVHDELVEVLGKESIELDLNAPSPLVIMLVG  107 (461)
Q Consensus        28 ~~~l~ei~~aLLeaDV~~~vv~~~~~~Ik~k~~~~~~~~~~~~~~~i~kiv~~eL~~lLg~~~~~l~~~~~~p~vIllvG  107 (461)
T Consensus       151 ~p~~~~l~~~L~~~Gvs~~la~~l~~~~~~~~---------~~~~-~~~~l~~~L~~~l~~~~~---~~~~~~~vvalVG  217 (412)
T PRK05703        151 PPEFAKLYKRLKESGLSPEIADKLLKLLLEDM---------NPRE-AWRYLLELLANMLPTRVE---DILEQGGVVALVG  217 (412)
T ss_pred             CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC---------CHHH-HHHHHHHHHHHHCCCCCC---CCCCCCCEEEEEC
T ss_conf             87899999999986999999999999866428---------9799-999999999975788876---6545673699988


Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCC-CEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE
Q ss_conf             44333468899999999861489-50782054221004779999851034742223321036899999999997415886
Q gi|254780711|r  108 LQGSGKTTTTAKIAYHLKTLKKK-KILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSARDGGYDA  186 (461)
Q Consensus       108 l~GsGKTTT~aKLA~~~~~~~~~-kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~a~~~~~D~  186 (461)
T Consensus       218 PTGVGKTTTiAKLAA~~~l~~~~~kV~lIT~DtyRigA~eQLk~Ya~ilgvp~~v~~~---~~~l-~~al~~--~~~~dl  291 (412)
T PRK05703        218 PTGVGKTTTLAKLAARYALEEGKDKVALITLDTYRIGAVEQLKTYAKIMGIPVKVAYD---PKEL-AKALEQ--LANCDL  291 (412)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECC---HHHH-HHHHHH--HCCCCE
T ss_conf             8887567699999999999729981799983767777999999999971973798479---9999-999987--158997


Q ss_pred             EEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHC-CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHH
Q ss_conf             998334422211246899999985138511000310111-2256888898876358440776411576633036777888
Q gi|254780711|r  187 VILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALT-GQDAVHLARNFDKIVDLTGIILTRMDGDGRGGAALSMRTV  265 (461)
Q Consensus       187 iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~-Gq~a~~~a~~F~~~~~i~giIlTKlD~~akgG~als~~~~  265 (461)
T Consensus       292 ILIDTaG~s~~d~~~~~eL~~~~~~~~~~~~~LVlsat~~~~dl~~i~~~f~~-~~~~~lI~TKlDEt~~~G~il~~~~~  370 (412)
T PRK05703        292 ILIDTAGRSQRDPRLISELKALIENSKPIDVYLVLSATTKYRDLKDIVKHFSR-LPLDGLILTKLDETSSLGSILSLLIE  370 (412)
T ss_pred             EEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCC-CCCCEEEEEEECCCCCCCHHHHHHHH
T ss_conf             99968988978999999999998624887189997598998999999998467-99987999711289986299999999


Q ss_pred             HCCCHHHEECCCCC-CCCCCCCHHHHHHHHHCCCCH
Q ss_conf             47873026158672-321001368899877358627
Q gi|254780711|r  266 TGKPIKAIGTGEKI-NDLENFFPDRIANRILGMGDV  300 (461)
Q Consensus       266 ~~~PI~fig~GE~~-~dle~F~p~~~~~riLGmgD~  300 (461)
T Consensus       371 ~~lplsy~t~GQ~VPeDi~~a~~~~l~~~~l~g~~~  406 (412)
T PRK05703        371 SGLPISYLTDGQRVPDDIKVATPEELVRLALGGFLK  406 (412)
T ss_pred             HCCCEEEEECCCCCHHHHHCCCHHHHHHHHHCCCCC
T ss_conf             887969994699972434228999999998587555