HHsearch alignment for GI: 254780711 and conserved domain: PRK05748

Probab=97.15  E-value=0.035  Score=36.85  Aligned_cols=114  Identities=23%  Similarity=0.212  Sum_probs=66.0

Q ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH--HHHHHCCCCCCCCCCCCC----HHHHHHH
Q ss_conf             4189962344333468899999999861489507820542210047799--998510347422233210----3689999
Q gi|254780711|r  100 PLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQL--RYLGEQIQVDTLEVIPEQ----SPEKIAI  173 (461)
Q Consensus       100 p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL--~~~a~~~~v~~~~~~~~~----dp~~i~~  173 (461)
T Consensus       203 g~LiviaaRP~mGKTa~alnia~~~a~~~~~~v~~fSlEM~----~~~l~~R~la~~s~v~~~~i~~g~l~~~~~~~~-~  277 (448)
T PRK05748        203 NDLIIVAARPSVGKTAFALNIAQNVATKTDKNVAIFSLEMG----AESLVMRMLCAEGRIDQQKLRTGQLTDEDWPKL-T  277 (448)
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCC----HHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHH-H
T ss_conf             73799984799876899999999999856980899817788----889999999997467777776289999999999-9


Q ss_pred             HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCH
Q ss_conf             99999974158869983344222112468999999851385110003101
Q gi|254780711|r  174 RATQSARDGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADA  223 (461)
Q Consensus       174 ~a~~~a~~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da  223 (461)
T Consensus       278 ~a~~~l~--~~~l~i~d~~~~-ti~-~i~~~~r~~~~~~-~~~~~vviDY  322 (448)
T PRK05748        278 IAVGSLS--DAPIYIDDTPGI-KVT-EIRARCRRLAQEH-GGLGLIVIDY  322 (448)
T ss_pred             HHHHHHH--CCCEEEECCCCC-CHH-HHHHHHHHHHHHC-CCCCEEEEEH
T ss_conf             9999986--598378558988-689-9999999999975-9988999716