HHsearch alignment for GI: 254780711 and conserved domain: PRK06674
>PRK06674 DNA polymerase III subunits gamma and tau; Validated.
Probab=96.79 E-value=0.069 Score=34.62 Aligned_cols=309 Identities=14% Similarity=0.133 Sum_probs=142.1
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEE--EECCCCCCCHHHHHHHHHHHCCCCCCCCCC----CCCHHHH
Q ss_conf 5884189962344333468899999999861489507--820542210047799998510347422233----2103689
Q gi|254780711|r 97 APSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKIL--MASLDVHRPAAQEQLRYLGEQIQVDTLEVI----PEQSPEK 170 (461)
Q Consensus 97 ~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~--lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~----~~~dp~~ 170 (461)
T Consensus 35 ~ri~HAyLF~GprGtGKts~Ari~AkaLnC~-~~~~~~pC~~C~~C~~--------i~~g~~~DviEiDaasn~gVd~IR 105 (563)
T PRK06674 35 EKVSHAYLFSGPRGTGKTSIAKVFAKAVNCE-HAPVAEPCNECPSCLG--------ITNGSISDVLEIDAASNNGVDEIR 105 (563)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHCCC-CCCCCCCCCCCHHHHH--------HHCCCCCCEEEECCCCCCCHHHHH
T ss_conf 9965034312899868999999999985799-9999887766878999--------855899877985255557879999
Q ss_pred HHHHHHHHH-HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHH----HHHHH--------
Q ss_conf 999999999-74158869983344222112468999999851385110003101112256888----89887--------
Q gi|254780711|r 171 IAIRATQSA-RDGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDAVHL----ARNFD-------- 237 (461)
Q Consensus 171 i~~~a~~~a-~~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a~~~----a~~F~-------- 237 (461)
T Consensus 106 ~i~~~v~~~P~~~~yKV~IIDeah~Lt~~A--~NALLKtLEEP-P~~viFILaTtep~ki~~TI~SRCQrf~F~ri~~~~ 182 (563)
T PRK06674 106 DIRDKVKFAPSAVEYKVYIIDEVHMLSIGA--FNALLKTLEEP-PGHVIFILATTEPHKIPPTIISRCQRFDFRRISVND 182 (563)
T ss_pred HHHHHHCCCCCCCCEEEEEEECHHHCCHHH--HHHHHHHHHCC-CCCEEEEEECCCHHHCCHHHHHHHEEEECCCCCHHH
T ss_conf 999982648867873799985456379999--99999986388-756499996599475847887331031278899999
Q ss_pred -----------HHCCCC----CEEEEECCCCCCCCHHHHHHHHHCCCHHHEECCCCCCCCCCCCHHHHHHHHHCCCCHHH
Q ss_conf -----------635844----07764115766330367778884787302615867232100136889987735862788
Q gi|254780711|r 238 -----------KIVDLT----GIILTRMDGDGRGGAALSMRTVTGKPIKAIGTGEKINDLENFFPDRIANRILGMGDVVS 302 (461)
Q Consensus 238 -----------~~~~i~----giIlTKlD~~akgG~als~~~~~~~PI~fig~GE~~~dle~F~p~~~~~riLGmgD~~~ 302 (461)
T Consensus 183 i~~rL~~I~~~E~i~~~~~aL~~Ia~~a~GsmR--DAlsiLdQ~---~s~~--~~~i~~-------~~v~~~lG~~~~~~ 248 (563)
T PRK06674 183 IVERLSTVVTNEGTQVEDEALQIIARAADGGMR--DALSLLDQA---ISFS--DERVTT-------EDVLAVTGAVSQQY 248 (563)
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHH--HHHHHHHHH---HHHC--CCCCCH-------HHHHHHHCCCCHHH
T ss_conf 999999999984999878899999997699788--999999999---9715--997689-------99999868998899
Q ss_pred HHHHHHHHHHHHH--HHHHHHHHHCCCCCHHHHHH----HHHHH--HCC-CCHHHHHHHHHCCCCCHHHHHHCCCCHHHH
Q ss_conf 9998742112678--99888653104637999999----99998--511-488999998731344234323111678888
Q gi|254780711|r 303 LVEKAARNLNEKQ--AALTAKKIAKGKFDLEDLAE----QFRQT--QKI-GGIGSILRMLPGMPSLKQNIMPSSFDDKTI 373 (461)
Q Consensus 303 l~e~~~~~~d~~~--~~~l~~k~~~g~F~l~Df~~----Ql~~i--~km-G~l~~il~miPG~~~~~~~~~~~~~~e~~l 373 (461)
T Consensus 249 ~~~l~~~i~~~d~~~~l~~~~~~~~~G~d~~~~~~dl~~~~r~~l~~k~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 326 (563)
T PRK06674 249 LGNLVECIRENDVSRALRIIDEMMGQGKDPVRLMEDFIYYYRDMLLYQTAPQLEHMLERVMVDEQF--RMLSEEMPPEVI 326 (563)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH--HHHHHCCCHHHH
T ss_conf 999999998489999999999999879999999999999999988742379567654311154999--999852899999
Q ss_pred HHHHHHHHCCCHHHHC--CCCCCCHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 8999997458987860--841133578999723---26679899999999999999999986068
Q gi|254780711|r 374 NHHIAIIASMTKEERA--NPSIIKHSRKKRIAA---GSGTNAAKINKLLKLHRQVAEMMHSTQGL 433 (461)
Q Consensus 374 k~~~aII~SMT~~Er~--~P~ll~~SR~~RIA~---GSG~~v~eVn~Llk~f~~m~kmmk~~~~~ 433 (461)
T Consensus 327 ~~~i~~l~~~~~~~r~s~~~~~~lE~~~vkl~~~~~~~~~~~~~~~~l~~~i~~le~~~~~~~~~ 391 (563)
T PRK06674 327 YEIIHTLSKSQQEMKWTNHPRIFLEVVMVQLCQQFMMQANGADRLQAIMNRMQQLEKELERVKKN 391 (563)
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999996147882188999999995303588777510678999999999999874046