HHsearch alignment for GI: 254780711 and conserved domain: PRK07270
>PRK07270 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.21 E-value=0.031 Score=37.26 Aligned_cols=304 Identities=15% Similarity=0.166 Sum_probs=145.1
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHH---CCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCC-CHHHHHH
Q ss_conf 5884189962344333468899999999861---48950782054221004779999851034742223321-0368999
Q gi|254780711|r 97 APSPLVIMLVGLQGSGKTTTTAKIAYHLKTL---KKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPE-QSPEKIA 172 (461)
Q Consensus 97 ~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~---~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~-~dp~~i~ 172 (461)
T Consensus 34 ~ri~HAyLF~GP~GtGKts~ArifAkaLnC~~~~~~~p--C~~C~~C~~--------i~~g~~~DviEidaas~~gVd~I 103 (557)
T PRK07270 34 GKISHAYLFSGPRGTGKTSAAKIFAKAMNCPNQVDGEP--CNNCDICRD--------ITNGSLEDVIEIDAASNNGVDEI 103 (557)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCC--CCCCHHHHH--------HHCCCCCCEEEECCCCCCCHHHH
T ss_conf 99540442108998689999999999957999899998--887779999--------87589997487347776788999
Q ss_pred HHHHHHHH----HCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHH----HHHHH-------
Q ss_conf 99999997----4158869983344222112468999999851385110003101112256888----89887-------
Q gi|254780711|r 173 IRATQSAR----DGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDAVHL----ARNFD------- 237 (461)
Q Consensus 173 ~~a~~~a~----~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a~~~----a~~F~------- 237 (461)
T Consensus 104 Rei~~~~~~~P~~~~yKV~IIDEah~Ls~~A--~NALLKtLEEP-P~~~vFIL~Ttep~kIl~TI~SRCQrf~F~~i~~~ 180 (557)
T PRK07270 104 RDIRDKSTYAPSRATYKVYIIDEVHMLSTGA--FNALLKTLEEP-TENVVFILATTELHKIPATILSRVQRFEFKSIKTK 180 (557)
T ss_pred HHHHHHHCCCCCCCCEEEEEECCHHHCCHHH--HHHHHHHHHCC-CCCEEEEEEECCHHHCCHHHHHHHHHCCCCCCCHH
T ss_conf 9999984238777883899971445349999--99899985289-98769999849947592888743000108889999
Q ss_pred ------------HHCCCCCEEEEECCCCCCCC--HHHHHHHHHCCCHHHEECCCCCCCCCCCCHHHHHHHHHCCCCHHHH
Q ss_conf ------------63584407764115766330--3677788847873026158672321001368899877358627889
Q gi|254780711|r 238 ------------KIVDLTGIILTRMDGDGRGG--AALSMRTVTGKPIKAIGTGEKINDLENFFPDRIANRILGMGDVVSL 303 (461)
Q Consensus 238 ------------~~~~i~giIlTKlD~~akgG--~als~~~~~~~PI~fig~GE~~~dle~F~p~~~~~riLGmgD~~~l 303 (461)
T Consensus 181 ~i~~~L~~I~~~E~i~~~~~aL~~Ia~~a~G~mRdAlsiLdQ~---~s~-~~~~~it-------~~~v~~~~G~~~~~~l 249 (557)
T PRK07270 181 AIREHLAWILDKEGISFEVEALNLIARRAEGGMRDALSILDQA---LSL-SQDNQVT-------IAIAEEITGSISLLAL 249 (557)
T ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH---HHC-CCCCCCC-------HHHHHHHHCCCCHHHH
T ss_conf 9999999999983998699999999997799687899999999---971-7999767-------9999999689989999
Q ss_pred HHHHHHHHHHHH--HHHHHHHHHCCCCCHHHHHHHHHH------HHCCCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHH
Q ss_conf 998742112678--998886531046379999999999------851148899999873134423432311167888889
Q gi|254780711|r 304 VEKAARNLNEKQ--AALTAKKIAKGKFDLEDLAEQFRQ------TQKIGGIGSILRMLPGMPSLKQNIMPSSFDDKTINH 375 (461)
Q Consensus 304 ~e~~~~~~d~~~--~~~l~~k~~~g~F~l~Df~~Ql~~------i~kmG~l~~il~miPG~~~~~~~~~~~~~~e~~lk~ 375 (461)
T Consensus 250 ~~l~~~~~~~d~~~~l~~~~~~~~~G~d~~~~~~dl~~~~Rdll~~k~~~~~~~~~~~------~--~~~~~~~~~~l~~ 321 (557)
T PRK07270 250 DDYVAALSQQDATKALAALETIFDSGKSMSRFATDLLTYLRDLLIVKAGGENTHHSAV------F--DENLSLSQDRIFQ 321 (557)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH------H--HHHHCCCHHHHHH
T ss_conf 9999999817999999999999986999999999999999976741227745555676------7--8887069999999
Q ss_pred HHHHHHCCCHHHHC--CCCCCCHHHHHHHHCCCC---------CCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99997458987860--841133578999723266---------7989999999999999999998606
Q gi|254780711|r 376 HIAIIASMTKEERA--NPSIIKHSRKKRIAAGSG---------TNAAKINKLLKLHRQVAEMMHSTQG 432 (461)
Q Consensus 376 ~~aII~SMT~~Er~--~P~ll~~SR~~RIA~GSG---------~~v~eVn~Llk~f~~m~kmmk~~~~ 432 (461)
T Consensus 322 ~i~~l~~~~~~~~~~~~p~i~lE~~~~kl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~ 389 (557)
T PRK07270 322 MIDVVTSSLPEIKKGTHPKIYAEMMTIRLAEIEQIASQANLPGELTAEIATLKQELAQLKQQLSQLQS 389 (557)
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999751478129999999998534565664335435788999999999999998753302