HHsearch alignment for GI: 254780711 and conserved domain: PRK07270

>PRK07270 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.21  E-value=0.031  Score=37.26  Aligned_cols=304  Identities=15%  Similarity=0.166  Sum_probs=145.1

Q ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHH---CCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCC-CHHHHHH
Q ss_conf             5884189962344333468899999999861---48950782054221004779999851034742223321-0368999
Q gi|254780711|r   97 APSPLVIMLVGLQGSGKTTTTAKIAYHLKTL---KKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPE-QSPEKIA  172 (461)
Q Consensus        97 ~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~---~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~-~dp~~i~  172 (461)
T Consensus        34 ~ri~HAyLF~GP~GtGKts~ArifAkaLnC~~~~~~~p--C~~C~~C~~--------i~~g~~~DviEidaas~~gVd~I  103 (557)
T PRK07270         34 GKISHAYLFSGPRGTGKTSAAKIFAKAMNCPNQVDGEP--CNNCDICRD--------ITNGSLEDVIEIDAASNNGVDEI  103 (557)
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCC--CCCCHHHHH--------HHCCCCCCEEEECCCCCCCHHHH
T ss_conf             99540442108998689999999999957999899998--887779999--------87589997487347776788999


Q ss_pred             HHHHHHHH----HCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHH----HHHHH-------
Q ss_conf             99999997----4158869983344222112468999999851385110003101112256888----89887-------
Q gi|254780711|r  173 IRATQSAR----DGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDAVHL----ARNFD-------  237 (461)
Q Consensus       173 ~~a~~~a~----~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a~~~----a~~F~-------  237 (461)
T Consensus       104 Rei~~~~~~~P~~~~yKV~IIDEah~Ls~~A--~NALLKtLEEP-P~~~vFIL~Ttep~kIl~TI~SRCQrf~F~~i~~~  180 (557)
T PRK07270        104 RDIRDKSTYAPSRATYKVYIIDEVHMLSTGA--FNALLKTLEEP-TENVVFILATTELHKIPATILSRVQRFEFKSIKTK  180 (557)
T ss_pred             HHHHHHHCCCCCCCCEEEEEECCHHHCCHHH--HHHHHHHHHCC-CCCEEEEEEECCHHHCCHHHHHHHHHCCCCCCCHH
T ss_conf             9999984238777883899971445349999--99899985289-98769999849947592888743000108889999


Q ss_pred             ------------HHCCCCCEEEEECCCCCCCC--HHHHHHHHHCCCHHHEECCCCCCCCCCCCHHHHHHHHHCCCCHHHH
Q ss_conf             ------------63584407764115766330--3677788847873026158672321001368899877358627889
Q gi|254780711|r  238 ------------KIVDLTGIILTRMDGDGRGG--AALSMRTVTGKPIKAIGTGEKINDLENFFPDRIANRILGMGDVVSL  303 (461)
Q Consensus       238 ------------~~~~i~giIlTKlD~~akgG--~als~~~~~~~PI~fig~GE~~~dle~F~p~~~~~riLGmgD~~~l  303 (461)
T Consensus       181 ~i~~~L~~I~~~E~i~~~~~aL~~Ia~~a~G~mRdAlsiLdQ~---~s~-~~~~~it-------~~~v~~~~G~~~~~~l  249 (557)
T PRK07270        181 AIREHLAWILDKEGISFEVEALNLIARRAEGGMRDALSILDQA---LSL-SQDNQVT-------IAIAEEITGSISLLAL  249 (557)
T ss_pred             HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH---HHC-CCCCCCC-------HHHHHHHHCCCCHHHH
T ss_conf             9999999999983998699999999997799687899999999---971-7999767-------9999999689989999


Q ss_pred             HHHHHHHHHHHH--HHHHHHHHHCCCCCHHHHHHHHHH------HHCCCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHH
Q ss_conf             998742112678--998886531046379999999999------851148899999873134423432311167888889
Q gi|254780711|r  304 VEKAARNLNEKQ--AALTAKKIAKGKFDLEDLAEQFRQ------TQKIGGIGSILRMLPGMPSLKQNIMPSSFDDKTINH  375 (461)
Q Consensus       304 ~e~~~~~~d~~~--~~~l~~k~~~g~F~l~Df~~Ql~~------i~kmG~l~~il~miPG~~~~~~~~~~~~~~e~~lk~  375 (461)
T Consensus       250 ~~l~~~~~~~d~~~~l~~~~~~~~~G~d~~~~~~dl~~~~Rdll~~k~~~~~~~~~~~------~--~~~~~~~~~~l~~  321 (557)
T PRK07270        250 DDYVAALSQQDATKALAALETIFDSGKSMSRFATDLLTYLRDLLIVKAGGENTHHSAV------F--DENLSLSQDRIFQ  321 (557)
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH------H--HHHHCCCHHHHHH
T ss_conf             9999999817999999999999986999999999999999976741227745555676------7--8887069999999


Q ss_pred             HHHHHHCCCHHHHC--CCCCCCHHHHHHHHCCCC---------CCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             99997458987860--841133578999723266---------7989999999999999999998606
Q gi|254780711|r  376 HIAIIASMTKEERA--NPSIIKHSRKKRIAAGSG---------TNAAKINKLLKLHRQVAEMMHSTQG  432 (461)
Q Consensus       376 ~~aII~SMT~~Er~--~P~ll~~SR~~RIA~GSG---------~~v~eVn~Llk~f~~m~kmmk~~~~  432 (461)
T Consensus       322 ~i~~l~~~~~~~~~~~~p~i~lE~~~~kl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~  389 (557)
T PRK07270        322 MIDVVTSSLPEIKKGTHPKIYAEMMTIRLAEIEQIASQANLPGELTAEIATLKQELAQLKQQLSQLQS  389 (557)
T ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99999999999751478129999999998534565664335435788999999999999998753302