HHsearch alignment for GI: 254780711 and conserved domain: PRK07764
>PRK07764 DNA polymerase III subunits gamma and tau; Validated.
Probab=96.86 E-value=0.041 Score=36.32 Aligned_cols=217 Identities=18% Similarity=0.189 Sum_probs=107.5
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCC-CEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC-HHHHHHHHH
Q ss_conf 884189962344333468899999999861489-507820542210047799998510347422233210-368999999
Q gi|254780711|r 98 PSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKK-KILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQ-SPEKIAIRA 175 (461)
Q Consensus 98 ~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~-kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~-dp~~i~~~a 175 (461)
T Consensus 35 ri~HAYLFsGprG~GKTt~ARilAkaLNC~~~~~~~PCg~C~sC~-----~i~~g~-~~~~DviEiDAAS~~gVddiReL 108 (775)
T PRK07764 35 RINHAYLFSGPRGCGKTSSARILARSLNCAQGPTSTPCGVCDSCV-----ALAPGG-PGSLDVVEIDAASHGGVDDAREL 108 (775)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH-----HHHCCC-CCCCCEEEECCCCCCCHHHHHHH
T ss_conf 976337623788878889999999996689999989888876378-----886389-88886687315655688999999
Q ss_pred HH---HHH-HCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCC-HHHHHHHHHHHHHCC---------
Q ss_conf 99---997-4158869983344222112468999999851385110003101112-256888898876358---------
Q gi|254780711|r 176 TQ---SAR-DGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTG-QDAVHLARNFDKIVD--------- 241 (461)
Q Consensus 176 ~~---~a~-~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~G-q~a~~~a~~F~~~~~--------- 241 (461)
T Consensus 109 ~e~~~y~P~~~ryKVyIIDEaHmls~~--afNALLKtLEEP-P~hvvFIl-aTTep~kip~TI~SRcq~f~Fr~i~~~~~ 184 (775)
T PRK07764 109 RERAFFAPAQSRYRIFIIDEAHMVTTA--GFNALLKIVEEP-PEHLIFIF-ATTEPEKVIGTIRSRTHHYPFRLVPPGTM 184 (775)
T ss_pred HHHCCCCCCCCCEEEEEEECHHHHCHH--HHHHHHHHHCCC-CCCEEEEE-ECCCHHHCCHHHHHHCCCCCCCCCCHHHH
T ss_conf 985476876786359998535440799--999998862278-64627999-54873547167764102345266999999
Q ss_pred --------------CCC----EEEEECCCCCCCCHHHHHHHHHCCCHHHEECCCCCCCCCCCCHHHHHHHHHCCCCHHHH
Q ss_conf --------------440----77641157663303677788847873026158672321001368899877358627889
Q gi|254780711|r 242 --------------LTG----IILTRMDGDGRGGAALSMRTVTGKPIKAIGTGEKINDLENFFPDRIANRILGMGDVVSL 303 (461)
Q Consensus 242 --------------i~g----iIlTKlD~~akgG~als~~~~~~~PI~fig~GE~~~dle~F~p~~~~~riLGmgD~~~l 303 (461)
T Consensus 185 ~~~l~~i~~~E~i~~~~~al~li~r~~~Gs~R--DalS~ldQ---l~a~~~~~-~v~-------~~~a~~llG~~~~~~l 251 (775)
T PRK07764 185 RPYLERICAQEGVVVDDAVLPLVIRAGGGSPR--DTLSVLDQ---LLAGAGDD-GVT-------YERAVALLGVTDVALI 251 (775)
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHH--HHHHHHHH---HHHCCCCC-CEE-------HHHHHHHHCCCCHHHH
T ss_conf 99999999983998798999999998289667--68999999---98404888-410-------9999998588858999
Q ss_pred HHHHHHHHHHHHHH--HHHHHHHCCCCCHHHHHHHH
Q ss_conf 99874211267899--88865310463799999999
Q gi|254780711|r 304 VEKAARNLNEKQAA--LTAKKIAKGKFDLEDLAEQF 337 (461)
Q Consensus 304 ~e~~~~~~d~~~~~--~l~~k~~~g~F~l~Df~~Ql 337 (461)
T Consensus 252 ~~~~~al~~~d~~~~~~~v~~~~~~G~d~~rf~~dL 287 (775)
T PRK07764 252 DDAVDALAAGDGAALFGVVDRVIEAGHDPRRFAEDL 287 (775)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 999999983789999999999998287889999999