HHsearch alignment for GI: 254780711 and conserved domain: PRK08082
>PRK08082 consensus.
Probab=96.74 E-value=0.074 Score=34.37 Aligned_cols=89 Identities=22% Similarity=0.238 Sum_probs=56.7
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH--HHHHHCCCCCCCCCCCCC-HHH--HHHHH
Q ss_conf 4189962344333468899999999861489507820542210047799--998510347422233210-368--99999
Q gi|254780711|r 100 PLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQL--RYLGEQIQVDTLEVIPEQ-SPE--KIAIR 174 (461)
Q Consensus 100 p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL--~~~a~~~~v~~~~~~~~~-dp~--~i~~~ 174 (461)
T Consensus 203 g~LiviaaRPsmGKTa~alnia~~~a~~~~~~V~~fSlEM~----~~~l~~R~la~~s~i~~~~i~~g~l~~~e~~~i~~ 278 (453)
T PRK08082 203 NDLIIVAARPSVGKTAFALNIAQNVATKTDENVAIFSLEMG----ADQLVMRMLCAEGNIDAQRLRTGSLTSDDWGKLTM 278 (453)
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCC----HHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHH
T ss_conf 85799986788757899999999999855994899731389----89999999971558886677518999999999999
Q ss_pred HHHHHHHCCCCEEEEECCCC
Q ss_conf 99999741588699833442
Q gi|254780711|r 175 ATQSARDGGYDAVILDTAGR 194 (461)
Q Consensus 175 a~~~a~~~~~D~iiiDTaGR 194 (461)
T Consensus 279 a~~~l--~~~~l~idd~~~~ 296 (453)
T PRK08082 279 AMGSL--SNAGIYIDDTPGI 296 (453)
T ss_pred HHHHH--CCCCEEEECCCCC
T ss_conf 99985--0697389789999