HHsearch alignment for GI: 254780711 and conserved domain: PRK08181

Probab=97.02  E-value=0.016  Score=39.38  Aligned_cols=143  Identities=16%  Similarity=0.209  Sum_probs=76.2

Q ss_pred             HHHHCCCCHHHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHH-HHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHH
Q ss_conf             9985246969999999999999830-31112699899999999-999998718774210002588418996234433346
Q gi|254780711|r   37 TFLEADVSLEVVQSFSKRVQEKAKG-EKILRSIQPGQMVIKIV-HDELVEVLGKESIELDLNAPSPLVIMLVGLQGSGKT  114 (461)
Q Consensus        37 aLLeaDV~~~vv~~~~~~Ik~k~~~-~~~~~~~~~~~~i~kiv-~~eL~~lLg~~~~~l~~~~~~p~vIllvGl~GsGKT  114 (461)
T Consensus        48 ~Lle~E~~~R~~rr~~rrlk~A~fp~~ktLe~fDf~--~~p~i~~~~i~~L~~~~----~fi~~~~-Nvil~Gp~GtGKT  120 (269)
T PRK08181         48 AIAEHEIAERARRRIERHLAEAHLPPGKTLDSFDFE--AVPMISKAQVMALAAGD----SWLAKGA-NLLLFGPPGGGKS  120 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCC--CCCCCCHHHHHHHHCCC----HHHHCCC-EEEEECCCCCCHH
T ss_conf             999999999999999999986897998886547855--68998999999996567----5886487-0899899998788


Q ss_pred             HHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf             88999999998614895078205422100477999985103474222332103689999999999741588699833442
Q gi|254780711|r  115 TTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSARDGGYDAVILDTAGR  194 (461)
Q Consensus       115 TT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~a~~~~~D~iiiDTaGR  194 (461)
T Consensus       121 hLA~Alg~~A~~-~G~~V~f~~~~~L----~~~L~~a-~---------~~~~~-----~~~~~--~l~~~dLLIiDe~G~  178 (269)
T PRK08181        121 HLAAAIGLALIE-NGWRVLFTRTTDL----VQKLQVA-R---------RELQL-----ESAIA--KLDKFDLLILDDLAY  178 (269)
T ss_pred             HHHHHHHHHHHH-CCCEEEEEEHHHH----HHHHHHH-H---------HCCCH-----HHHHH--HHHCCCEEEEHHCCC
T ss_conf             999999999998-7993999789999----9999997-7---------55839-----99999--974446012201056


Q ss_pred             CCCHHHHHHHHHHH
Q ss_conf             22112468999999
Q gi|254780711|r  195 NHINDSLMQEISEI  208 (461)
Q Consensus       195 ~~~d~~lm~El~~i  208 (461)
T Consensus       179 ~~~~~~~~~~lf~l  192 (269)
T PRK08181        179 VTKDQAETSVLFEL  192 (269)
T ss_pred             CCCCHHHHHHHHHH
T ss_conf             67998999999999