HHsearch alignment for GI: 254780711 and conserved domain: PRK08233

Probab=97.18  E-value=0.0036  Score=44.43  Aligned_cols=84  Identities=21%  Similarity=0.251  Sum_probs=51.3

Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC-CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             8841899623443334688999999998614895078205422-100477999985103474222332103689999999
Q gi|254780711|r   98 PSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVH-RPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRAT  176 (461)
Q Consensus        98 ~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~-R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~  176 (461)
T Consensus         1 kkp~IIgIaGgSgSGKTtla~~l~~~l~---~~~--~~~~D~y~~~~~~~~~~~~~~~-~~~~----d~~d~~~l-~~~l   69 (182)
T PRK08233          1 KKTKIITIAAVSGGGKTTLTERLTHKLK---NSK--ALYFDRYDFDNCPEDICKWIDD-GANY----SEWVLTPL-IKDI   69 (182)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHCC---CCE--EEEECCCCCCCCHHHHHHHHCC-CCCC----CHHHHHHH-HHHH
T ss_conf             9988999968886789999999999746---775--8996665554687889987406-7786----66669999-9999


Q ss_pred             HHHHH-CCCCEEEEECC
Q ss_conf             99974-15886998334
Q gi|254780711|r  177 QSARD-GGYDAVILDTA  192 (461)
Q Consensus       177 ~~a~~-~~~D~iiiDTa  192 (461)
T Consensus        70 ~~l~~~~~~d~iIvEgi   86 (182)
T PRK08233         70 QELIAKSNVDYIIVDYP   86 (182)
T ss_pred             HHHHCCCCCCEEEEEEE
T ss_conf             99855998728999644