HHsearch alignment for GI: 254780711 and conserved domain: PRK09354

Probab=96.86  E-value=0.023  Score=38.31  Aligned_cols=94  Identities=13%  Similarity=0.210  Sum_probs=60.1

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCC-CCCHHHHHHHHHHHHH
Q ss_conf             189962344333468899999999861489507820542210047799998510347422233-2103689999999999
Q gi|254780711|r  101 LVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVI-PEQSPEKIAIRATQSA  179 (461)
Q Consensus       101 ~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~-~~~dp~~i~~~a~~~a  179 (461)
T Consensus        61 RivEi~G~esSGKTtlal~~iaeaQk~Gg-~~a~iD--aE~a--ld--~~~a~~lGVd~d~llv~qpd~~Eqal~i~e~L  133 (350)
T PRK09354         61 RIVEIYGPESSGKTTLALHAIAEAQKAGG-TAAFID--AEHA--LD--PVYAKKLGVDIDNLLVSQPDTGEQALEIADAL  133 (350)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHCCC-CEEEEE--ECCC--CC--HHHHHHCCCCHHHEEEECCCHHHHHHHHHHHH
T ss_conf             08999889877799999999999997599-479996--0002--79--88999849771571785686799999999999


Q ss_pred             H-HCCCCEEEEECCCCCCCHHHH
Q ss_conf             7-415886998334422211246
Q gi|254780711|r  180 R-DGGYDAVILDTAGRNHINDSL  201 (461)
Q Consensus       180 ~-~~~~D~iiiDTaGR~~~d~~l  201 (461)
T Consensus       134 vrsg~vd~IVvDSVaAL~pk~Ei  156 (350)
T PRK09354        134 VRSGAVDLIVVDSVAALVPKAEI  156 (350)
T ss_pred             HHCCCCCEEEEECCCCCCCHHHH
T ss_conf             85488418998253345768887