HHsearch alignment for GI: 254780711 and conserved domain: PRK09435
>PRK09435 arginine/ornithine transport system ATPase; Provisional.
Probab=98.46 E-value=5.9e-06 Score=65.63 Aligned_cols=155 Identities=17% Similarity=0.270 Sum_probs=100.0
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC---HHH----HHHHHHHHCCCCCCCCCCCCC---
Q ss_conf 5884189962344333468899999999861489507820542210---047----799998510347422233210---
Q gi|254780711|r 97 APSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRP---AAQ----EQLRYLGEQIQVDTLEVIPEQ--- 166 (461)
Q Consensus 97 ~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~---aA~----eQL~~~a~~~~v~~~~~~~~~--- 166 (461)
T Consensus 46 ~g~a~~iGiTG~pG~GKStli~~l~~~~~~-~g~~v~vlavDPsS~~sgGaiLGDr~Rm~~~~~~~~~fiRs~~srg~lg 124 (325)
T PRK09435 46 TGNALRIGITGVPGVGKSTFIEALGMHLIE-QGHKVAVLAVDPSSTRTGGSILGDKTRMERLSRHPNAFIRPSPSSGTLG 124 (325)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHH-CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
T ss_conf 798259974279998688999999999996-7985899997899998886101038888761479984884067788867
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHH-CCC-CC
Q ss_conf 3689999999999741588699833442221124689999998513851100031011122568888988763-584-40
Q gi|254780711|r 167 SPEKIAIRATQSARDGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDAVHLARNFDKI-VDL-TG 244 (461)
Q Consensus 167 dp~~i~~~a~~~a~~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a~~~a~~F~~~-~~i-~g 244 (461)
T Consensus 125 g~~~~~~~~~~~~~a~g~d~i~iETvGvGQ~e~~v-------~~~~--d~~~~~~~p~~GD~~----Q~~K~GImEiaDi 191 (325)
T PRK09435 125 GVARKTRETMLLCEAAGFDVILVETVGVGQSETAV-------AGMV--DFFLLLQLPGAGDEL----QGIKKGIMELADL 191 (325)
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHH-------HHHC--CEEEEEECCCCCCHH----HHHHHHHHHHCCE
T ss_conf 73354999999999779998999706777148899-------8742--668888358876088----9988657750426
Q ss_pred EEEEECCCCCCCCHHHHHHHH
Q ss_conf 776411576633036777888
Q gi|254780711|r 245 IILTRMDGDGRGGAALSMRTV 265 (461)
Q Consensus 245 iIlTKlD~~akgG~als~~~~ 265 (461)
T Consensus 192 ~vVNKaDgd~~~~A~~t~~e~ 212 (325)
T PRK09435 192 IVINKADGDNHTAARRAAAEY 212 (325)
T ss_pred EEEECCCCCCHHHHHHHHHHH
T ss_conf 899776755658999999999