HHsearch alignment for GI: 254780711 and conserved domain: PRK11537
>PRK11537 putative GTP-binding protein YjiA; Provisional.
Probab=98.04 E-value=0.00029 Score=52.80 Aligned_cols=169 Identities=16% Similarity=0.228 Sum_probs=98.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCC-------CCCCCCCHHHHHHHH
Q ss_conf 8996234433346889999999986148950782054221004779999851034742-------223321036899999
Q gi|254780711|r 102 VIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDT-------LEVIPEQSPEKIAIR 174 (461)
Q Consensus 102 vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~-------~~~~~~~dp~~i~~~ 174 (461)
T Consensus 6 VtiltGFLGaGKTTlL~~lL---~~~~~~riaVivNEfGe-v~iD~~li-~~-~~~~v~eL~nGCiCCs~~~dl~~~l~~ 79 (317)
T PRK11537 6 VTLLTGFLGAGKTTLLRHIL---NEQHGYKIAVIENEFGE-VSVDDQLI-GD-RATQIKTLTNGCICCSRSNELEDALLD 79 (317)
T ss_pred EEEEEECCCCCHHHHHHHHH---HCCCCCCEEEEEECCCC-CCCHHHHH-HC-CCCCEEEECCCCEEEEECCHHHHHHHH
T ss_conf 89983088889999999997---27789978999837614-53329887-35-653268844773687305228999999
Q ss_pred HHHHHHHC--CCCEEEEECCCCCCCHHHHHHHH---HHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHCC-CCCEEEE
Q ss_conf 99999741--58869983344222112468999---999851385110003101112256888898876358-4407764
Q gi|254780711|r 175 ATQSARDG--GYDAVILDTAGRNHINDSLMQEI---SEIKSLTNPHEILLVADALTGQDAVHLARNFDKIVD-LTGIILT 248 (461)
Q Consensus 175 a~~~a~~~--~~D~iiiDTaGR~~~d~~lm~El---~~i~~~~~p~e~~lV~da~~Gq~a~~~a~~F~~~~~-i~giIlT 248 (461)
T Consensus 80 l~~~~~~~~~~~D~IiIEtsG-lAdP~~I~~~~~~~~~l~~~~~Ld~vVtvVDa~~~~~~l~~~~~~~~Qi~~AD~illn 158 (317)
T PRK11537 80 LLDNLDRGNIQFDRLVIECTG-MADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILLT 158 (317)
T ss_pred HHHHHHCCCCCCCEEEEECCC-CCCHHHHHHHHHHHHHHHHHEECCCEEEEEEHHHHHHHHHCCHHHHHHHHHCCEEEEE
T ss_conf 998664357775479996257-7883999999861256565320365599986655576653034667666318689974
Q ss_pred ECCCCCCCCHHHHHHHH--HCCCHHHEECCC
Q ss_conf 11576633036777888--478730261586
Q gi|254780711|r 249 RMDGDGRGGAALSMRTV--TGKPIKAIGTGE 277 (461)
Q Consensus 249 KlD~~akgG~als~~~~--~~~PI~fig~GE 277 (461)
T Consensus 159 K~Dlv~~~~~l~~~l~~lNp~A~i~~~~~~~ 189 (317)
T PRK11537 159 KTDVAGEAEKLRERLARINARAPVYTVTHGD 189 (317)
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 2002365999999999868998489964687