HHsearch alignment for GI: 254780711 and conserved domain: PRK13342

Probab=96.81  E-value=0.0072  Score=42.11  Aligned_cols=115  Identities=17%  Similarity=0.129  Sum_probs=52.5

Q ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             84189962344333468899999999861489507820542210047799998510347422233210368999999999
Q gi|254780711|r   99 SPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQS  178 (461)
Q Consensus        99 ~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~  178 (461)
T Consensus        37 ~~s-~Il~GPPG~GKTTlA~iiA~~~~----~~f~~lnA---------------------------~~~gv~dir~ii~~   84 (417)
T PRK13342         37 LSS-MILWGPPGTGKTTLARIIAGATD----AEFEALSA---------------------------VTSGVKDLREVIEE   84 (417)
T ss_pred             CCE-EEEECCCCCCHHHHHHHHHHHHC----CCEEEEEC---------------------------CCCCHHHHHHHHHH
T ss_conf             975-99889699989999999999868----98899614---------------------------10388999999999


Q ss_pred             HHHC---CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCCEEEEECCCC
Q ss_conf             9741---58869983344222112468999999851385110003101112256888898876358440776411576
Q gi|254780711|r  179 ARDG---GYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDAVHLARNFDKIVDLTGIILTRMDGD  253 (461)
Q Consensus       179 a~~~---~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a~~~a~~F~~~~~i~giIlTKlD~~  253 (461)
T Consensus        85 a~~~~~~~~tilfiDEIHRfnK~QQ-----D~LLp~vE~g~ii-LIgATTENP~f~in~aLlSRc~v--f~l~~L~~~  154 (417)
T PRK13342         85 AKQSRLGRRTILFIDEIHRFNKAQQ-----DALLPHVEDGTIT-LIGATTENPSFEVNPALLSRAQV--FELKPLSEE  154 (417)
T ss_pred             HHHHHCCCCEEEEEECHHHCCHHHH-----HHHHHHHHCCCEE-EEEECCCCCHHHCCHHHHHHHHH--EECCCCCHH
T ss_conf             8863148965999978200588999-----9998751126569-99741579225348989856570--020589999