HHsearch alignment for GI: 254780711 and conserved domain: PRK13642
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional.
Probab=96.45 E-value=0.021 Score=38.61 Aligned_cols=198 Identities=16% Similarity=0.171 Sum_probs=94.7
Q ss_pred CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf 10002588418996234433346889999999986148950782054221004779999851034742223321036899
Q gi|254780711|r 92 ELDLNAPSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKI 171 (461)
Q Consensus 92 ~l~~~~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i 171 (461)
T Consensus 27 s~~i~~G--e~~aiiG~sGsGKSTL~~~l~Gl~~~~~G-~I~~~G~~i~~----~~~~~~r~~ig~-VfQ~p~~~l~~~t 98 (277)
T PRK13642 27 SFSITKG--EWVSIIGQNGSGKSTTARLIDGLFEEFEG-IVKIDGERLTA----ENVWNLRRKIGM-VFQNPDNQFVGAT 98 (277)
T ss_pred EEEECCC--CEEEEECCCCCHHHHHHHHHHCCCCCCCC-EEEECCEECCC----CCHHHHHCCCEE-EEECCCCCCCCCC
T ss_conf 7998899--89999999996899999999638998884-89999999985----788888517689-9989763257550
Q ss_pred HHHHHHHHHHC-CC--------------CEEEEECCCCCCCHHH-HHHHHHHHHHHCCCCCCCCCCC-HHCCHHHHHHHH
Q ss_conf 99999999741-58--------------8699833442221124-6899999985138511000310-111225688889
Q gi|254780711|r 172 AIRATQSARDG-GY--------------DAVILDTAGRNHINDS-LMQEISEIKSLTNPHEILLVAD-ALTGQDAVHLAR 234 (461)
Q Consensus 172 ~~~a~~~a~~~-~~--------------D~iiiDTaGR~~~d~~-lm~El~~i~~~~~p~e~~lV~d-a~~Gq~a~~~a~ 234 (461)
T Consensus 99 V~e~i~~g~~~~~~~~~e~~~~v~~~l~~~~l~~~~~~~P~~LSGGqrQRvaIA~aLa~~P~ililDEPTs~LD~~~~~~ 178 (277)
T PRK13642 99 VEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTREPARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRSE 178 (277)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHH
T ss_conf 88889877766699999999999999987799656557912289999999999999966999999958876589899999
Q ss_pred HH------HHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHEECCCCCCC---CCCC-CHHHHHHHHHCCCCHHHHH
Q ss_conf 88------763584407764115766330367778884787302615867232---1001-3688998773586278899
Q gi|254780711|r 235 NF------DKIVDLTGIILTRMDGDGRGGAALSMRTVTGKPIKAIGTGEKIND---LENF-FPDRIANRILGMGDVVSLV 304 (461)
Q Consensus 235 ~F------~~~~~i~giIlTKlD~~akgG~als~~~~~~~PI~fig~GE~~~d---le~F-~p~~~~~riLGmgD~~~l~ 304 (461)
T Consensus 179 i~~ll~~L~~~~~~Tii~iTH-d--------l~~~~~-aDrv~vm~~G~Iv~~G~~~evf~~p~~l~~~~l~~P~~~~l~ 248 (277)
T PRK13642 179 IMRVIHEIKDKYHLTVLSITH-D--------LDEAAS-SDRILVMRAGEIIKEAAPSELFATSEDMVEIGLDVPFSSNLM 248 (277)
T ss_pred HHHHHHHHHHHCCCEEEEEEE-C--------HHHHHH-CCEEEEEECCEEEEECCHHHHHCCHHHHHHCCCCCCHHHHHH
T ss_conf 999999999816989999945-8--------899971-998999989999997689998769677987799998799999
Q ss_pred HHH
Q ss_conf 987
Q gi|254780711|r 305 EKA 307 (461)
Q Consensus 305 e~~ 307 (461)
T Consensus 249 ~~L 251 (277)
T PRK13642 249 KDL 251 (277)
T ss_pred HHH
T ss_conf 999