HHsearch alignment for GI: 254780711 and conserved domain: PRK13643
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional.
Probab=95.96 E-value=0.014 Score=39.81 Aligned_cols=227 Identities=15% Similarity=0.155 Sum_probs=95.3
Q ss_pred CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
Q ss_conf 00025884189962344333468899999999861489507820542210047799998510347422233210368999
Q gi|254780711|r 93 LDLNAPSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIA 172 (461)
Q Consensus 93 l~~~~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~ 172 (461)
T Consensus 27 l~I~~G--e~vaiiG~nGsGKSTLl~~l~Gll~p~~G~-V~~~~~~i~~~~~~~~~~~~~~~vG~Vf-Q~p~~ql~~~tV 102 (288)
T PRK13643 27 LEVKKG--SYTALIGHTGSGKSTLLQHLNGLLQPTEGK-VTVGDIVVSSTSKQKEIKPVRKKVGVVF-QFPESQLFEETV 102 (288)
T ss_pred EEECCC--CEEEEECCCCCHHHHHHHHHHCCCCCCCCE-EEECCEECCCCCHHHHHHHHHHCEEEEE-ECCCCCCCHHHH
T ss_conf 798599--899999999947999999997488888856-9999998568773544798775179999-777320243369
Q ss_pred HHHHHHHHH--------------CCCCEE-EEE-CCCCCCC--HHHHHHHHHHHHHHCCCCCCCCCCCH-HCCHHHHHHH
Q ss_conf 999999974--------------158869-983-3442221--12468999999851385110003101-1122568888
Q gi|254780711|r 173 IRATQSARD--------------GGYDAV-ILD-TAGRNHI--NDSLMQEISEIKSLTNPHEILLVADA-LTGQDAVHLA 233 (461)
Q Consensus 173 ~~a~~~a~~--------------~~~D~i-iiD-TaGR~~~--d~~lm~El~~i~~~~~p~e~~lV~da-~~Gq~a~~~a 233 (461)
T Consensus 103 ~e~vafg~~n~g~~~~e~~~~v~~~l~~vgl~d~~~~r~p~~LSGG-qkqRvaiA~aLa~~P~vLlLDEPTs~LDp~~~~ 181 (288)
T PRK13643 103 LKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSPFELSGG-QMRRVAIAGILAMEPEVLVLDEPTAGLDPKARI 181 (288)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHH-HHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHH
T ss_conf 9999989998699989999999999997599366752797639999-999999999997499999995885558999999
Q ss_pred ------HHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHEECCCCCCCC---CCCC-HHHHHHHHHCCCCHHHH
Q ss_conf ------9887635844077641157663303677788847873026158672321---0013-68899877358627889
Q gi|254780711|r 234 ------RNFDKIVDLTGIILTRMDGDGRGGAALSMRTVTGKPIKAIGTGEKINDL---ENFF-PDRIANRILGMGDVVSL 303 (461)
Q Consensus 234 ------~~F~~~~~i~giIlTKlD~~akgG~als~~~~~~~PI~fig~GE~~~dl---e~F~-p~~~~~riLGmgD~~~l 303 (461)
T Consensus 182 ~i~~ll~~l~~-~G~TiI~vtH-d--------~~~v~~~adrvivl~~G~Iv~~Gtp~evf~~~~~l~~~~l~~P~~~~l 251 (288)
T PRK13643 182 EMMQLFESIHQ-SGQTVVLVTH-L--------MDDVADYADYVYLLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHF 251 (288)
T ss_pred HHHHHHHHHHH-CCCEEEEECC-C--------HHHHHHHCCEEEEEECCEEEEECCHHHHHCCHHHHHHCCCCCCHHHHH
T ss_conf 99999999995-3999999860-8--------999999799999998999999878899866999999769999849999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
Q ss_conf 998742112678998886531046379999999999851
Q gi|254780711|r 304 VEKAARNLNEKQAALTAKKIAKGKFDLEDLAEQFRQTQK 342 (461)
Q Consensus 304 ~e~~~~~~d~~~~~~l~~k~~~g~F~l~Df~~Ql~~i~k 342 (461)
T Consensus 252 ~~~L~~~g------~--~~~~~~p~t~~e~~~~l~~l~~ 282 (288)
T PRK13643 252 ADQLQKTG------A--VTFEKLPITRAELVTLLTSLSV 282 (288)
T ss_pred HHHHHHCC------C--CCCCCCCCCHHHHHHHHHHHCC
T ss_conf 99999769------9--8867798989999999996142