HHsearch alignment for GI: 254780711 and conserved domain: PRK13705
>PRK13705 plasmid-partitioning protein SopA; Provisional.
Probab=98.23 E-value=1.1e-05 Score=63.72 Aligned_cols=58 Identities=22% Similarity=0.291 Sum_probs=41.5
Q ss_pred HHHHHHHCCCCCCCCCCCCCCEEEEEECCC-CCCHHHHHHHHHHHHHHHCCCCEEEECC-CCC
Q ss_conf 999987187742100025884189962344-3334688999999998614895078205-422
Q gi|254780711|r 80 DELVEVLGKESIELDLNAPSPLVIMLVGLQ-GSGKTTTTAKIAYHLKTLKKKKILMASL-DVH 140 (461)
Q Consensus 80 ~eL~~lLg~~~~~l~~~~~~p~vIllvGl~-GsGKTTT~aKLA~~~~~~~~~kV~lv~~-Dt~ 140 (461)
T Consensus 88 ~~lR~~~~~~--p~R~~g~~~~VIAVaNqKGGvGKTTTavnLA~~LAl-~G~RVLlID~LDPQ 147 (388)
T PRK13705 88 NHMRDVFGTR--LRRAEDEFPPVIGVAAHKGGVYKTSVSVHLAQDLAL-KGLRVLLVEGNDPQ 147 (388)
T ss_pred HHHHHHHCCC--CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH-CCCEEEEEECCCCC
T ss_conf 9999996438--899999987289995278885599999999999997-79908999587888