HHsearch alignment for GI: 254780711 and conserved domain: PRK13976

>PRK13976 thymidylate kinase; Provisional.
Probab=96.78  E-value=0.025  Score=37.92  Aligned_cols=114  Identities=23%  Similarity=0.336  Sum_probs=55.6

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHH-CCCCEEEECCCCCCCHHH---HHHHHHHHC-CCCCCCC--CCCCCHHHHHHHHH
Q ss_conf             9962344333468899999999861-489507820542210047---799998510-3474222--33210368999999
Q gi|254780711|r  103 IMLVGLQGSGKTTTTAKIAYHLKTL-KKKKILMASLDVHRPAAQ---EQLRYLGEQ-IQVDTLE--VIPEQSPEKIAIRA  175 (461)
Q Consensus       103 IllvGl~GsGKTTT~aKLA~~~~~~-~~~kV~lv~~Dt~R~aA~---eQL~~~a~~-~~v~~~~--~~~~~dp~~i~~~a  175 (461)
T Consensus         3 IvfEGiDGsGKsTq~~~L~~~L~~~~~~~~~~~----trEPggt~~ge~IR~~ll~~~~~~~~te~lLf~A~R~eh~~~~   78 (202)
T PRK13976          3 ITFEGIDGSGKTTQSRLLAEYLSQIYGENNVVL----TREPGGTSFNESVRGLLLSTKNLDKLSELLLFIAMRREHFVKV   78 (202)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEE----ECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             999899999899999999999986069986898----3799998278999999716557996999999999999999999


Q ss_pred             HHHHHHCCCCEEEEEC----------CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCH
Q ss_conf             9999741588699833----------44222112468999999851385110003101
Q gi|254780711|r  176 TQSARDGGYDAVILDT----------AGRNHINDSLMQEISEIKSLTNPHEILLVADA  223 (461)
Q Consensus       176 ~~~a~~~~~D~iiiDT----------aGR~~~d~~lm~El~~i~~~~~p~e~~lV~da  223 (461)
T Consensus        79 I~PaL~~g-~~VI~DRy~~St~AYQg~~~-gl~~~~i~~l~~~~~~~~PDlt~~-Ldi  133 (202)
T PRK13976         79 ILPALTQG-KIVICDRFIDSTIAYQGYGC-GIDLKLIRDLNDLVVDIYPDITFI-LDI  133 (202)
T ss_pred             HHHHHHCC-CEEEECCCCCHHHHHHCCCC-CCCHHHHHHHHHHHCCCCCCEEEE-EEC
T ss_conf             88888669-98997485355788732267-989999999999840789887999-837