HHsearch alignment for GI: 254780711 and conserved domain: TIGR01007
>TIGR01007 eps_fam capsular exopolysaccharide family; InterPro: IPR005702 This family describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis (EPS). At least 13 genes EpsA to EpsM in streptococcus species seem to direct the EPS proteins and share high homology. ; GO: 0030234 enzyme regulator activity, 0045227 capsule polysaccharide biosynthetic process.
Probab=98.19 E-value=2.5e-05 Score=60.91 Aligned_cols=145 Identities=19% Similarity=0.243 Sum_probs=94.2
Q ss_pred CEEEEEE-CCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCH----------------------HHHHHHHHHHC-C
Q ss_conf 4189962-3443334688999999998614895078205422100----------------------47799998510-3
Q gi|254780711|r 100 PLVIMLV-GLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPA----------------------AQEQLRYLGEQ-I 155 (461)
Q Consensus 100 p~vIllv-Gl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~a----------------------A~eQL~~~a~~-~ 155 (461)
T Consensus 19 ~K~l~itS~~~~eGKsT~S~NiA~~fAq-aGyKTLlIDgD~R~sv~~~~Fk~~n~~~GLtn~L~g~~dl~~~i~~T~ise 97 (207)
T TIGR01007 19 IKVLLITSVKAGEGKSTTSANIAVSFAQ-AGYKTLLIDGDMRNSVMSGTFKSQNKIKGLTNFLSGNTDLSDAICETNISE 97 (207)
T ss_pred EEEEEEEECCCCCCCEEEEHHHHHHHHH-CCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHCCCCCC
T ss_conf 0589984110588862410788999985-685588875465866036786588876563332214545333420265467
Q ss_pred CCCCCCCC-CCCHHHHHHH----HHHHHHHHCCCCEEEEECCCCCCC-HHHHHHHHHHHHHHCCCCCCCCCCCH-HCCHH
Q ss_conf 47422233-2103689999----999999741588699833442221-12468999999851385110003101-11225
Q gi|254780711|r 156 QVDTLEVI-PEQSPEKIAI----RATQSARDGGYDAVILDTAGRNHI-NDSLMQEISEIKSLTNPHEILLVADA-LTGQD 228 (461)
Q Consensus 156 ~v~~~~~~-~~~dp~~i~~----~a~~~a~~~~~D~iiiDTaGR~~~-d~~lm~El~~i~~~~~p~e~~lV~da-~~Gq~ 228 (461)
T Consensus 98 nL~vi~sG~vPPNPt~LL~s~~F~~l~e~~~~~fD~iiiDTPPig~V~DAai------~a~~--~d~~~LV~~A~~~~k~ 169 (207)
T TIGR01007 98 NLDVITSGPVPPNPTELLQSSNFKTLIETLRKYFDYIIIDTPPIGTVIDAAI------IARA--VDASILVTDAGKIKKR 169 (207)
T ss_pred CCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH------HHHH--HCCEEEEEECCCCCHH
T ss_conf 8727517887877547888899999999987168889995188666788999------9987--2977988722532646
Q ss_pred HHHHHHHHHHHCC--CCCEEEEECCCC
Q ss_conf 6888898876358--440776411576
Q gi|254780711|r 229 AVHLARNFDKIVD--LTGIILTRMDGD 253 (461)
Q Consensus 229 a~~~a~~F~~~~~--i~giIlTKlD~~ 253 (461)
T Consensus 170 ~v~KAK~~LEq~G~~~LGvvLNK~d~s 196 (207)
T TIGR01007 170 EVKKAKEQLEQAGSKFLGVVLNKVDIS 196 (207)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCC
T ss_conf 789999999861784115888882576