HHsearch alignment for GI: 254780711 and conserved domain: TIGR02533
>TIGR02533 type_II_gspE general secretory pathway protein E; InterPro: IPR013369 GspE, the E protein of the type II secretion system, is also referred to as the main terminal branch of the general secretion pathway. ; GO: 0005524 ATP binding, 0008565 protein transporter activity, 0015628 protein secretion by the type II secretion system, 0015627 type II protein secretion system complex.
Probab=97.00 E-value=0.00018 Score=54.31 Aligned_cols=122 Identities=20% Similarity=0.262 Sum_probs=67.3
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE-EEEEECCCCC
Q ss_conf 999999852469699999999999998303111269989999999999999871877421000258841-8996234433
Q gi|254780711|r 33 EIRRTFLEADVSLEVVQSFSKRVQEKAKGEKILRSIQPGQMVIKIVHDELVEVLGKESIELDLNAPSPL-VIMLVGLQGS 111 (461)
Q Consensus 33 ei~~aLLeaDV~~~vv~~~~~~Ik~k~~~~~~~~~~~~~~~i~kiv~~eL~~lLg~~~~~l~~~~~~p~-vIllvGl~Gs 111 (461)
T Consensus 196 DiRVSt~Pt~fGERvVMRLLDK~~~~l~L~~L--Gm~~~------~l~~~~~li-----------~rpHGIiLVTGPTGS 256 (495)
T TIGR02533 196 DIRVSTVPTSFGERVVMRLLDKDAVRLDLEAL--GMSPE------LLSSLERLI-----------KRPHGIILVTGPTGS 256 (495)
T ss_pred EEEEEECCCCCCCEEEHHHHCHHHHHHHHHHC--CCCHH------HHHHHHHHH-----------HCCCCEEEECCCCCC
T ss_conf 67885305899710000011204777758864--88888------999999997-----------188961884177898
Q ss_pred CHHHHHHHHHHHHHHHCCCCEEEECCC--CCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 346889999999986148950782054--221004779999851034742223321036899999999997415886998
Q gi|254780711|r 112 GKTTTTAKIAYHLKTLKKKKILMASLD--VHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSARDGGYDAVIL 189 (461)
Q Consensus 112 GKTTT~aKLA~~~~~~~~~kV~lv~~D--t~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~a~~~~~D~iii 189 (461)
T Consensus 257 GKtTTLYaaL~~L-N~~~~NIlTvE-DPVEY~i~GIgQ~Qvn~k-IglTFA-------------~GLRaILRQDPDiiMv 320 (495)
T TIGR02533 257 GKTTTLYAALSRL-NTPERNILTVE-DPVEYQIEGIGQIQVNPK-IGLTFA-------------AGLRAILRQDPDIIMV 320 (495)
T ss_pred CHHHHHHHHHHHH-CCCCCCEEEEE-CCEEEEECCCCEEEECCC-CCHHHH-------------HHHHHHHCCCCCEEEE
T ss_conf 5258899999863-58997156865-782476248763651465-430388-------------8878864279988998