HHsearch alignment for GI: 254780711 and conserved domain: TIGR02640

>TIGR02640 gas_vesic_GvpN gas vesicle protein GvpN; InterPro: IPR013462 The GvpN protein is associated with the production of gas vesicles produced in some prokaryotes to give cells buoyancy , . It belongs to a larger family of ATPases .; GO: 0000166 nucleotide binding, 0005524 ATP binding, 0031412 gas vesicle organization and biogenesis, 0031411 gas vesicle.
Probab=95.27  E-value=0.027  Score=37.78  Aligned_cols=166  Identities=19%  Similarity=0.275  Sum_probs=88.0

Q ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             58841899623443334688999999998614895078205422100477999985103474222332103689999999
Q gi|254780711|r   97 APSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRAT  176 (461)
Q Consensus        97 ~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~  176 (461)
T Consensus        20 ~G~P--vHl~GPaG~GKT~LA~hvA----~~r~RPV~l~~Gd~-------eL~~------~DLvG~~~g~~~~kv----~   76 (265)
T TIGR02640        20 SGYP--VHLRGPAGTGKTTLAMHVA----RKRDRPVVLINGDA-------ELTT------SDLVGSYAGYTRKKV----V   76 (265)
T ss_pred             CCCC--EEEECCCCCCHHHHHHHHH----HHCCCCEEEEECCC-------CCCC------CCCCCCCCCCEEEEE----E
T ss_conf             7886--6744788855689999999----73689689986582-------3265------442315467522223----2


Q ss_pred             HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHH-------CCC----------CCCCCCCCHHCCHHHHHHHHHHHHH
Q ss_conf             99974158869983344222112468999999851-------385----------1100031011122568888988763
Q gi|254780711|r  177 QSARDGGYDAVILDTAGRNHINDSLMQEISEIKSL-------TNP----------HEILLVADALTGQDAVHLARNFDKI  239 (461)
Q Consensus       177 ~~a~~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~-------~~p----------~e~~lV~da~~Gq~a~~~a~~F~~~  239 (461)
T Consensus        77 DqfihnV--~K~~d~~~~~W~D~rLt~Av~eG~TLVYdEF~RskP~~nNVLLSvlEE~vL~LPg~~~~~~------Yv~V  148 (265)
T TIGR02640        77 DQFIHNV--VKLEDIVRQNWVDNRLTLAVREGFTLVYDEFTRSKPETNNVLLSVLEEGVLELPGKRGESR------YVDV  148 (265)
T ss_pred             ECCEEEE--ECCCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC------CEEE
T ss_conf             0121113--4251220026678357899756972766475788620456567555523215888787787------2257


Q ss_pred             CCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHEECCCCCCCCCCCCHHHHHHHHHCC----CCHHHHHHHHHHHH--HH
Q ss_conf             5844077641157663303677788847873026158672321001368899877358----62788999874211--26
Q gi|254780711|r  240 VDLTGIILTRMDGDGRGGAALSMRTVTGKPIKAIGTGEKINDLENFFPDRIANRILGM----GDVVSLVEKAARNL--NE  313 (461)
Q Consensus       240 ~~i~giIlTKlD~~akgG~als~~~~~~~PI~fig~GE~~~dle~F~p~~~~~riLGm----gD~~~l~e~~~~~~--d~  313 (461)
T Consensus       149 hP~FR~IfT------------------SNp~EYAGVh~~QDA--------LlDRL~ti~~D~~D~~~e~ai~~~~t~~~~  202 (265)
T TIGR02640       149 HPEFRVIFT------------------SNPVEYAGVHETQDA--------LLDRLVTISMDYPDEDTETAILRAKTDVAE  202 (265)
T ss_pred             CCCCCEEEC------------------CCCCCCCCCCCHHHH--------HHHHHCCCCCCCCCHHHHHHHHHHHHCCCH
T ss_conf             887024631------------------487010576771667--------766440045785444789999998606124


Q ss_pred             HHHHHH
Q ss_conf             789988
Q gi|254780711|r  314 KQAALT  319 (461)
Q Consensus       314 ~~~~~l  319 (461)
T Consensus       203 ~~a~~I  208 (265)
T TIGR02640       203 ESAATI  208 (265)
T ss_pred             HHHHHH
T ss_conf             678999