HHsearch alignment for GI: 254780711 and conserved domain: TIGR02928
>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=96.83 E-value=0.029 Score=37.49 Aligned_cols=138 Identities=17% Similarity=0.202 Sum_probs=78.6
Q ss_pred CCCC--CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC---CCC-EEEEC
Q ss_conf 1112--69989999999999999871877421000258841899623443334688999999998614---895-07820
Q gi|254780711|r 63 KILR--SIQPGQMVIKIVHDELVEVLGKESIELDLNAPSPLVIMLVGLQGSGKTTTTAKIAYHLKTLK---KKK-ILMAS 136 (461)
Q Consensus 63 ~~~~--~~~~~~~i~kiv~~eL~~lLg~~~~~l~~~~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~---~~k-V~lv~ 136 (461)
T Consensus 12 Y~Pden~i~hRdeqI~~l~~~L~~~l~P--------G~~P~Ni~iYGkTGtGKT~vt~~v~~~l~~~~~~~d~~D~~~~~ 83 (383)
T TIGR02928 12 YVPDENRIVHRDEQIEELAKALRPILRP--------GSRPSNIFIYGKTGTGKTAVTKYVMKELEEAAEDRDVRDVSTVY 83 (383)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCC--------CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 7027424668678999999998875067--------48987258878889878899999999999986226997158999
Q ss_pred CCCCCCHHHHH-HHHHHHCC-----CCCCCCCCCCCHHHHHHHHHHHHHHH-CCCC--EEEEECCCCC--CCHHH-----
Q ss_conf 54221004779-99985103-----47422233210368999999999974-1588--6998334422--21124-----
Q gi|254780711|r 137 LDVHRPAAQEQ-LRYLGEQI-----QVDTLEVIPEQSPEKIAIRATQSARD-GGYD--AVILDTAGRN--HINDS----- 200 (461)
Q Consensus 137 ~Dt~R~aA~eQ-L~~~a~~~-----~v~~~~~~~~~dp~~i~~~a~~~a~~-~~~D--~iiiDTaGR~--~~d~~----- 200 (461)
T Consensus 84 ~NC~~~~T~y~~~~~L~~~ln~~~~~~~v--P~tG-~s~~~~~~~l~~~l~~~~~~~~~ivLDEiD~Lv~~~~d~PAyS~ 160 (383)
T TIGR02928 84 INCQILDTSYQVLVELANQLNRRGSGEEV--PTTG-LSTSEVFRELYKELNRERGDSLIIVLDEIDKLVRKDDDDPAYSK 160 (383)
T ss_pred ECCCCCCCHHHHHHHHHHHHCCCCCCCCC--CCCC-CCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCCCCHHHHH
T ss_conf 77854684699999999985157788889--8877-87899999999998320188799986231022158888807878
Q ss_pred HHHHHHHHHHH
Q ss_conf 68999999851
Q gi|254780711|r 201 LMQEISEIKSL 211 (461)
Q Consensus 201 lm~El~~i~~~ 211 (461)
T Consensus 161 ~LY~L~Ra~~~ 171 (383)
T TIGR02928 161 LLYQLSRAREN 171 (383)
T ss_pred HHHHHHHHHHC
T ss_conf 85343310003