HHsearch alignment for GI: 254780711 and conserved domain: TIGR03371
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PMID:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=98.27 E-value=9.1e-06 Score=64.21 Aligned_cols=159 Identities=19% Similarity=0.110 Sum_probs=79.9
Q ss_pred EEEEE-CCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHH---------H----------HHHH--HHHCCCCCC
Q ss_conf 89962-344333468899999999861489507820542210047---------7----------9999--851034742
Q gi|254780711|r 102 VIMLV-GLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQ---------E----------QLRY--LGEQIQVDT 159 (461)
Q Consensus 102 vIllv-Gl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~---------e----------QL~~--~a~~~~v~~ 159 (461)
T Consensus 3 iIav~n~KGGVGKTT~avNLA~~La~-~G~rVLlIDlDpQ~~l~~~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (246)
T TIGR03371 3 VIAIVGIKGGVGRTTLTAALASALKL-LGEPVLAIDLDPQNLLRLHFGMDWSVRDGWARALLAGEDWRAAAYRSSDGVLF 81 (246)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHH-CCCCEEEEECCCCCCHHHHCCCCCCCCCCHHHHHHCCCCHHHHHEECCCCEEE
T ss_conf 99997599985499999999999996-89978999759998503224888753456999982799888952557898289
Q ss_pred CCCCC----------CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHC-CHH
Q ss_conf 22332----------1036899999999997415886998334422211246899999985138511000310111-225
Q gi|254780711|r 160 LEVIP----------EQSPEKIAIRATQSARDGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALT-GQD 228 (461)
Q Consensus 160 ~~~~~----------~~dp~~i~~~a~~~a~~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~-Gq~ 228 (461)
T Consensus 82 ip~~~~~~~~~~~~~~~~~-~~l~~~l~~l~~~~~D~viiD~pp~l~~~~---~---~a--l~aad~vlipv~~~~~s~~ 152 (246)
T TIGR03371 82 LPYGTLSADEREAYQAHDA-GWLARLLQQLDLAARDWVLIDLPRGPSPIT---D---QA--LAAADLVLVVVNADAACYA 152 (246)
T ss_pred EECCCCCHHHHHHHCCCCH-HHHHHHHHHHCCCCCCEEEEECCCCCCHHH---H---HH--HHHCCEEEEEECCCHHHHH
T ss_conf 7089847778987604478-999999986303679889994899874999---9---99--9988947998189989999
Q ss_pred ----HHHHHHHHHHHCCCCCEEEEECCCCCCCCH-HHHH-HHHHCCCH
Q ss_conf ----688889887635844077641157663303-6777-88847873
Q gi|254780711|r 229 ----AVHLARNFDKIVDLTGIILTRMDGDGRGGA-ALSM-RTVTGKPI 270 (461)
Q Consensus 229 ----a~~~a~~F~~~~~i~giIlTKlD~~akgG~-als~-~~~~~~PI 270 (461)
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~iv~n~~~~~~~~~~~~~~~l~~~~~~~~ 200 (246)
T TIGR03371 153 TLHQLALALLARSVPPDGIHYLINQFQPARQLSRDVRAVLRATLGSRL 200 (246)
T ss_pred HHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCE
T ss_conf 999999999984277675178863026401589999999999749881