HHsearch alignment for GI: 254780711 and conserved domain: TIGR03594
>TIGR03594 GTPase_EngA ribosome-associated GTPase EngA. EngA (YfgK, Der) is a ribosome-associated essential GTPase with a duplication of its GTP-binding domain. It is broadly to universally distributed among bacteria. It appears to function in ribosome biogenesis or stability.
Probab=95.65 E-value=0.19 Score=31.27 Aligned_cols=144 Identities=24% Similarity=0.315 Sum_probs=77.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 89962344333468899999999861489507820542210047799998510347422233210368999999999974
Q gi|254780711|r 102 VIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSARD 181 (461)
Q Consensus 102 vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~a~~ 181 (461)
T Consensus 1 ~VaIvGrpNVGKStLfN~L~-------~~~~aIv~-~~---------------~G~TR-------D~~~------~~~~~ 44 (429)
T TIGR03594 1 VVAIVGRPNVGKSTLFNRLT-------GKRDAIVA-DT---------------PGVTR-------DRKY------GDAEW 44 (429)
T ss_pred CEEEECCCCCCHHHHHHHHH-------CCCEEECC-CC---------------CCCCC-------CCEE------EEEEE
T ss_conf 98999999987899999987-------88617615-98---------------99887-------7337------99999
Q ss_pred CCCCEEEEECCCCCCCHHHHHHHHHH-HHHHC-CCCCCCCCCCHHCCH--HHHHHHHHHHHHCCCCCEEEEECCCCCCCC
Q ss_conf 15886998334422211246899999-98513-851100031011122--568888988763584407764115766330
Q gi|254780711|r 182 GGYDAVILDTAGRNHINDSLMQEISE-IKSLT-NPHEILLVADALTGQ--DAVHLARNFDKIVDLTGIILTRMDGDGRGG 257 (461)
Q Consensus 182 ~~~D~iiiDTaGR~~~d~~lm~El~~-i~~~~-~p~e~~lV~da~~Gq--~a~~~a~~F~~~~~i~giIlTKlD~~akgG 257 (461)
T Consensus 45 ~~~~~~liDT~G~~~~~~~~~~~~~~q~~~ai~~aDlIlfVvD~~~git~~D~~i~~~Lrk~~k~vilviNK~D~~~-~~ 123 (429)
T TIGR03594 45 GGREFILIDTGGIEEDDDGLDKQIREQAEIAIEEADVILFVVDGREGLTPEDEEIAKWLRKSGKPVILVANKIDGKK-ED 123 (429)
T ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCC-HH
T ss_conf 99079999898989874378999999999999867999999857768986799999999871997899998346753-14
Q ss_pred HHHHHHHHHCCC-HHHEEC--CCCCCCC
Q ss_conf 367778884787-302615--8672321
Q gi|254780711|r 258 AALSMRTVTGKP-IKAIGT--GEKINDL 282 (461)
Q Consensus 258 ~als~~~~~~~P-I~fig~--GE~~~dl 282 (461)
T Consensus 124 ~~~~ef~~LG~~~~i~iSA~h~~Gi~~L 151 (429)
T TIGR03594 124 AVAAEFYSLGFGEPIPISAEHGRGIGDL 151 (429)
T ss_pred HHHHHHHHHCCCCEEEEEECCCCCHHHH
T ss_conf 5699999836898688742046799999