HHsearch alignment for GI: 254780711 and conserved domain: TIGR03598

>TIGR03598 GTPase_YsxC ribosome biogenesis GTP-binding protein YsxC/EngB. Members of this protein family are a GTPase associated with ribosome biogenesis, typified by YsxC from Bacillus subutilis. The family is widely but not universally distributed among bacteria. Members commonly are called EngB based on homology to EngA, one of several other GTPases of ribosome biogenesis. Cutoffs as set find essentially all bacterial members, but also identify large numbers of eukaryotic (probably organellar) sequences. This protein is found in about 80 percent of bacterial genomes.
Probab=96.19  E-value=0.08  Score=34.13  Aligned_cols=121  Identities=20%  Similarity=0.272  Sum_probs=60.7

Q ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             58841899623443334688999999998614895078205422100477999985103474222332103689999999
Q gi|254780711|r   97 APSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRAT  176 (461)
Q Consensus        97 ~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~  176 (461)
T Consensus        16 ~~~p-~IaivGrpNvGKSTL~N~L~----g--~k~~a~vs-~~--pGtTr---------~i~~~~~--------------   62 (179)
T TIGR03598        16 DDGP-EIAFAGRSNVGKSSLINALT----N--RKKLARTS-KT--PGRTQ---------LINFFEV--------------   62 (179)
T ss_pred             CCCC-EEEEECCCCCCHHHHHHHHH----C--CCCEEEEC-CC--CCEEE---------ECCEEEE--------------
T ss_conf             8897-89998699988899999986----8--98558970-89--97366---------0232010--------------


Q ss_pred             HHHHHCCCCEEEEECCCC-----CCCHHHHHHH-HHHHHHH-CCCCCCCCCCCHHCC--HHHHHHHHHHHHHCCC-CCEE
Q ss_conf             999741588699833442-----2211246899-9999851-385110003101112--2568888988763584-4077
Q gi|254780711|r  177 QSARDGGYDAVILDTAGR-----NHINDSLMQE-ISEIKSL-TNPHEILLVADALTG--QDAVHLARNFDKIVDL-TGII  246 (461)
Q Consensus       177 ~~a~~~~~D~iiiDTaGR-----~~~d~~lm~E-l~~i~~~-~~p~e~~lV~da~~G--q~a~~~a~~F~~~~~i-~giI  246 (461)
T Consensus        63 ------~~~~~lvDtpGyG~~~~~~~~~~~~~~~~~~~~~~~~~l~~villiDa~~gl~~~D~~i~~~l~~~-~kp~iiv  135 (179)
T TIGR03598        63 ------NDGFRLVDLPGYGYAKVSKEEKEKWQKLIEEYLRGRENLKGVVLLMDIRHPLKELDLEMLEWLDER-GIPVLIV  135 (179)
T ss_pred             ------CCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHC-CCCEEEE
T ss_conf             ------473699977760211278888999999999999998864302898743779989999999999975-9988999


Q ss_pred             EEECCCCCCCC
Q ss_conf             64115766330
Q gi|254780711|r  247 LTRMDGDGRGG  257 (461)
Q Consensus       247 lTKlD~~akgG  257 (461)
T Consensus       136 lNK~Dll~~~~  146 (179)
T TIGR03598       136 LTKADKLKKSE  146 (179)
T ss_pred             EECCCCCCHHH
T ss_conf             97813069899