HHsearch alignment for GI: 254780711 and conserved domain: cd00009
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Probab=97.54 E-value=0.00071 Score=49.79 Aligned_cols=79 Identities=18% Similarity=0.102 Sum_probs=49.7
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 84189962344333468899999999861489507820542210047799998510347422233210368999999999
Q gi|254780711|r 99 SPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQS 178 (461)
Q Consensus 99 ~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~ 178 (461)
T Consensus 18 ~~~~ill~GppGtGKT~la~~ia~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~ 79 (151)
T cd00009 18 PPKNLLLYGPPGTGKTTLARAIANELFR-PGAPFLYLNASDLLEGLVVAELFGHF-----------------LVRLLFEL 79 (151)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCC-CCCCEEEEEHHHCCHHHHHHHHHHHH-----------------HHHHHHHH
T ss_conf 9980899899998865999999997121-37982785477704677775760577-----------------88989999
Q ss_pred HHHCCCCEEEEECCCCC
Q ss_conf 97415886998334422
Q gi|254780711|r 179 ARDGGYDAVILDTAGRN 195 (461)
Q Consensus 179 a~~~~~D~iiiDTaGR~ 195 (461)
T Consensus 80 ~~~~~~~vl~iDEi~~l 96 (151)
T cd00009 80 AEKAKPGVLFIDEIDSL 96 (151)
T ss_pred HHHCCCCEEEEECHHHC
T ss_conf 99769986982016655