HHsearch alignment for GI: 254780711 and conserved domain: cd01890
>cd01890 LepA LepA subfamily. LepA belongs to the GTPase family of and exhibits significant homology to the translation factors EF-G and EF-Tu, indicating its possible involvement in translation and association with the ribosome. LepA is ubiquitous in bacteria and eukaryota (e.g. yeast GUF1p), but is missing from archaea. This pattern of phyletic distribution suggests that LepA evolved through a duplication of the EF-G gene in bacteria, followed by early transfer into the eukaryotic lineage, most likely from the promitochondrial endosymbiont. Yeast GUF1p is not essential and mutant cells did not reveal any marked phenotype.
Probab=95.95 E-value=0.047 Score=35.87 Aligned_cols=122 Identities=19% Similarity=0.214 Sum_probs=58.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCC-CEEEE--CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 89962344333468899999999861489-50782--0542210047799998510347422233210368999999999
Q gi|254780711|r 102 VIMLVGLQGSGKTTTTAKIAYHLKTLKKK-KILMA--SLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQS 178 (461)
Q Consensus 102 vIllvGl~GsGKTTT~aKLA~~~~~~~~~-kV~lv--~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~ 178 (461)
T Consensus 2 NiaiiGHvd~GKTTL~~~ll~~t---g~i~~~~~~~~~~D~~---~~E~eR------giTi~~-----~~~~~~---~~~ 61 (179)
T cd01890 2 NFSIIAHIDHGKSTLADRLLELT---GTVSKREMKEQVLDSM---DLERER------GITIKA-----QTVRLN---YKA 61 (179)
T ss_pred EEEEECCCCCCHHHHHHHHHHHC---CCCCCCCCCCEECCCC---HHHHHC------CCEEEE-----EEEEEE---EEC
T ss_conf 59999489989899999999985---9954145732441651---767863------866874-----336888---413
Q ss_pred HHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHH-----HHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf 97415886998334422211246899999985138511000310111225-----688889887635844077641157
Q gi|254780711|r 179 ARDGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQD-----AVHLARNFDKIVDLTGIILTRMDG 252 (461)
Q Consensus 179 a~~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~-----a~~~a~~F~~~~~i~giIlTKlD~ 252 (461)
T Consensus 62 ~~~~~~~in~iDtPGh----~dF~~~~~~al~~--~D~allVVda~~Gv~~qT~~~~~~a~~~~--~p~-ivviNKiD~ 131 (179)
T cd01890 62 KDGQEYLLNLIDTPGH----VDFSYEVSRSLAA--CEGALLLVDATQGVEAQTLANFYLALENN--LEI-IPVINKIDL 131 (179)
T ss_pred CCCCCEEEEEEECCCC----CCCHHHHHHHHHH--HCEEEEEEECCCCCCHHHHHHHHHHHHCC--CCE-EEEEECCCC
T ss_conf 6787148999989986----4517789889975--44278998647787374899999998769--988-999865556