>cd01897 NOG NOG1 is a nucleolar GTP-binding protein present in eukaryotes ranging from trypanosomes to humans. NOG1 is functionally linked to ribosome biogenesis and found in association with the nuclear pore complexes and identified in many preribosomal complexes. Thus, defects in NOG1 can lead to defects in 60S biogenesis. The S. cerevisiae NOG1 gene is essential for cell viability, and mutations in the predicted G motifs abrogate function. It is a member of the ODN family of GTP-binding proteins that also includes the bacterial Obg and DRG proteins.

Probab=96.72 E-value=0.032 Score=37.16 Aligned_cols=145 Identities=15% Similarity=0.157 Sum_probs=72.7 Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH Q ss_conf 89962344333468899999999861489507820542210047799998510347422233210368999999999974 Q gi|254780711|r 102 VIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSARD 181 (461) Q Consensus 102 vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~a~~ 181 (461) T Consensus 2 ~VaivG~pNvGKStL~N~L~-------g~~~~-v~-~--~p~T-----T------r~~~~~~---------------~~~ 44 (168) T cd01897 2 TLVIAGYPNVGKSSLVNKLT-------RAKPE-VA-P--YPFT-----T------KSLFVGH---------------FDY 44 (168) T ss_pred EEEEECCCCCCHHHHHHHHH-------CCCCE-EC-C--CCCC-----C------CCCEEEE---------------EEE T ss_conf 79998899988999999995-------89860-23-7--5872-----3------5743689---------------998 Q ss_pred CCCCEEEEECCCCCCCHHHHHH--HHHHHHHHCC-CCCCCCCCCHHCC--HHHHHHHHHHHHHCC-----CCCEEEEECC Q ss_conf 1588699833442221124689--9999985138-5110003101112--256888898876358-----4407764115 Q gi|254780711|r 182 GGYDAVILDTAGRNHINDSLMQ--EISEIKSLTN-PHEILLVADALTG--QDAVHLARNFDKIVD-----LTGIILTRMD 251 (461) Q Consensus 182 ~~~D~iiiDTaGR~~~d~~lm~--El~~i~~~~~-p~e~~lV~da~~G--q~a~~~a~~F~~~~~-----i~giIlTKlD 251 (461) T Consensus 45 ~~~~~~liDTpGi~~~~~~~~~~ie~~~~~~l~~~~d~il~viD~~~~~~~~~~~~~~l~~~i~~~~~~~p~i~v~NK~D 124 (168) T cd01897 45 KYLRWQVIDTPGLLDRPLEERNTIEMQAITALAHLRAAVLFLFDPSETCGYSLEEQLSLFEEIKPLFKNKPVIVVLNKID 124 (168) T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC T ss_conf 37276872488655674788889999999999835776899996887678489999999998776525888799994753 Q ss_pred CCCCCC--HHHHHHHHHCCCHHHEE--CCCCCCCCC Q ss_conf 766330--36777888478730261--586723210 Q gi|254780711|r 252 GDGRGG--AALSMRTVTGKPIKAIG--TGEKINDLE 283 (461) Q Consensus 252 ~~akgG--~als~~~~~~~PI~fig--~GE~~~dle 283 (461) T Consensus 125 l~~~~~~~~~~~~~~~~~~~vi~ISA~~g~Gi~~L~ 160 (168) T cd01897 125 LLTFEDLSEIEEEEELEGEEVLKISTLTEEGVDEVK 160 (168) T ss_pred CCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHH T ss_conf 458100799999997089988999815896999999

HHsearch alignment for GI: 254780711 and conserved domain: cd01897