HHsearch alignment for GI: 254780711 and conserved domain: cd02032
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=98.08 E-value=0.00016 Score=54.80 Aligned_cols=197 Identities=23% Similarity=0.297 Sum_probs=106.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC-----------CCHHHHHHHHHH---HCC-----------C
Q ss_conf 899623443334688999999998614895078205422-----------100477999985---103-----------4
Q gi|254780711|r 102 VIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVH-----------RPAAQEQLRYLG---EQI-----------Q 156 (461)
Q Consensus 102 vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~-----------R~aA~eQL~~~a---~~~-----------~ 156 (461)
T Consensus 2 kiaiyGKGGIGKSTttaNl~aaLA~-~G~kVl~IgcDpk~Dst~~L~g~~~~tvld~l~~~~~~~~~~~~~d~v~~g~~g 80 (267)
T cd02032 2 VLAVYGKGGIGKSTTSSNLSVALAK-RGKKVLQIGCDPKHDSTFTLTGFLIPTVIDILEEVDFHYEELWPEDVIYEGYGG 80 (267)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH-CCCEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHCCCHHHCCHHHHHHCCCCC
T ss_conf 7999779965787789999999998-799599977899515567526988683999998608866641477875307678
Q ss_pred CCCCCCC---CC----CHHHHHHHHHHHHHH-HCCCCEEEEECCCCCC---CHHHHHHHHHHHHHHCCCCCCCCCCCH--
Q ss_conf 7422233---21----036899999999997-4158869983344222---112468999999851385110003101--
Q gi|254780711|r 157 VDTLEVI---PE----QSPEKIAIRATQSAR-DGGYDAVILDTAGRNH---INDSLMQEISEIKSLTNPHEILLVADA-- 223 (461)
Q Consensus 157 v~~~~~~---~~----~dp~~i~~~a~~~a~-~~~~D~iiiDTaGR~~---~d~~lm~El~~i~~~~~p~e~~lV~da-- 223 (461)
T Consensus 81 v~cvEaGgP~pg~Gcagrgi~~~~~lL~~l~~~~~~D~Vl~DvlgdVvcgGFa~pi-~---------~Ad~~~iVTs~e~ 150 (267)
T cd02032 81 VDCVEAGGPPAGAGCGGYVVGETVKLLKELNLFEEYDVILFDVLGDVVCGGFAAPL-N---------YADYALIVTDNDF 150 (267)
T ss_pred CEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCC-C---------CCCEEEEEECCCH
T ss_conf 45766589999988776404899999987166434778999536654456656761-0---------0688999956718
Q ss_pred HCCHHHHHHHHHHHH-----HCCCCCEEEEECCCCCCCCHHH-HHHHHHCCCHHHEECCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 112256888898876-----3584407764115766330367-7788847873026158672321001368899877358
Q gi|254780711|r 224 LTGQDAVHLARNFDK-----IVDLTGIILTRMDGDGRGGAAL-SMRTVTGKPIKAIGTGEKINDLENFFPDRIANRILGM 297 (461)
Q Consensus 224 ~~Gq~a~~~a~~F~~-----~~~i~giIlTKlD~~akgG~al-s~~~~~~~PI~fig~GE~~~dle~F~p~~~~~riLGm 297 (461)
T Consensus 151 ~sl~aAn~I~~~i~~~~~~~~~rl~GlI~Nr~~~----~~~i~~fa~~lg~~lig---------~VP~d~~V~~se~~g~ 217 (267)
T cd02032 151 DSIFAANRIAAAVREKAKTYKVRLAGLIANRTDK----TDLIDKFVEAVGMPVLA---------VLPLIEDIRRSRVKGK 217 (267)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC----HHHHHHHHHHHCCCEEE---------ECCCCHHHHHHHHCCC
T ss_conf 7899999999999997533797642278746985----78999999972994699---------6699338899987398
Q ss_pred CCHHHHHHHHHHHH--H--HHHHHHHHHHHHCC
Q ss_conf 62788999874211--2--67899888653104
Q gi|254780711|r 298 GDVVSLVEKAARNL--N--EKQAALTAKKIAKG 326 (461)
Q Consensus 298 gD~~~l~e~~~~~~--d--~~~~~~l~~k~~~g 326 (461)
T Consensus 218 ----tvie~~p~~~~~s~~a~~Yr~LA~~i~~n 246 (267)
T cd02032 218 ----TLFEMDESDEELAYRCDYYLLIADQLLAG 246 (267)
T ss_pred ----EEEEECCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf ----68984899843789999999999999839