HHsearch alignment for GI: 254780711 and conserved domain: cd03116

>cd03116 MobB Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes. In E. coli, the synthesis of Moco involves genes from several loci: moa, mob, mod, moe and mog. The mob locus contains mobA and mobB genes. MobB catalyzes the attachment of the guanine dinucleotide to molybdopterin.
Probab=96.43  E-value=0.0057  Score=42.88  Aligned_cols=72  Identities=26%  Similarity=0.406  Sum_probs=50.7

Q ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             41899623443334688999999998614895078205422100477999985103474222332103689999999999
Q gi|254780711|r  100 PLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSA  179 (461)
Q Consensus       100 p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~a  179 (461)
T Consensus         1 mkii~ivG~snSGKTTLi~kli~~l~~-~G~~V~~iKH~~H~-------------f~~----D~~GkDS~r--------~   54 (159)
T cd03116           1 MKVIGFVGYSGSGKTTLLEKLIPALSA-RGLRVAVIKHDHHD-------------FDI----DTPGKDSYR--------H   54 (159)
T ss_pred             CEEEEEEECCCCCHHHHHHHHHHHHHH-CCCEEEEEEECCCC-------------CCC----CCCCCHHHH--------H
T ss_conf             929999967999999999999999997-79859899734767-------------777----789844177--------6


Q ss_pred             HHCCCCEEEEECCCCCCC
Q ss_conf             741588699833442221
Q gi|254780711|r  180 RDGGYDAVILDTAGRNHI  197 (461)
Q Consensus       180 ~~~~~D~iiiDTaGR~~~  197 (461)
T Consensus        55 ~~AGA~~v~v~s~~~~~l   72 (159)
T cd03116          55 REAGAEEVLVSSPRRWAL   72 (159)
T ss_pred             HHCCCCEEEEECCCEEEE
T ss_conf             752973799975671887