>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.

Probab=95.67 E-value=0.026 Score=37.90 Aligned_cols=103 Identities=20% Similarity=0.168 Sum_probs=54.3 Q ss_pred CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH Q ss_conf 00025884189962344333468899999999861489507820542210047799998510347422233210368999 Q gi|254780711|r 93 LDLNAPSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIA 172 (461) Q Consensus 93 l~~~~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~ 172 (461) T Consensus 21 ~~i~~g--e~~~l~G~NGsGKTTl~~~l~G~~~~~~G~-i~~--~~~~~i~y~~Q---------------LSgGqkqr-- 78 (144) T cd03221 21 LTINPG--DRIGLVGRNGAGKSTLLKLIAGELEPDEGI-VTW--GSTVKIGYFEQ---------------LSGGEKMR-- 78 (144) T ss_pred EEECCC--CEEEEECCCCCCHHHHHHHHHCCCCCCCEE-EEE--CCCCEEEEEHH---------------CCHHHHHH-- T ss_conf 998799--999999899984999999984898898509-999--99608998700---------------79999999-- Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC Q ss_conf 9999999741588699833442221124689999998513851100031 Q gi|254780711|r 173 IRATQSARDGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVA 221 (461) Q Consensus 173 ~~a~~~a~~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~ 221 (461) T Consensus 79 -~~la~al~~~p~iliLDEPt-~~LD~~~~~~i~~~l~~~~--~tii~v 123 (144) T cd03221 79 -LALAKLLLENPNLLLLDEPT-NHLDLESIEALEEALKEYP--GTVILV 123 (144) T ss_pred -HHHHHHHCCCCCEEEEECCC-CCCCHHHHHHHHHHHHHCC--CEEEEE T ss_conf -99999972599899995775-5589999999999999709--999999

HHsearch alignment for GI: 254780711 and conserved domain: cd03221