HHsearch alignment for GI: 254780711 and conserved domain: cd04159
>cd04159 Arl10_like Arl10-like subfamily. Arl9/Arl10 was identified from a human cancer-derived EST dataset. No functional information about the subfamily is available at the current time, but crystal structures of human Arl10b and Arl10c have been solved.
Probab=95.63 E-value=0.056 Score=35.31 Aligned_cols=86 Identities=30% Similarity=0.364 Sum_probs=44.9
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 99623443334688999999998614895078205422100477999985103474222332103689999999999741
Q gi|254780711|r 103 IMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSARDG 182 (461)
Q Consensus 103 IllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~a~~~ 182 (461)
T Consensus 2 I~llG~~~~GKTsll~~~~~-----~~f~~-----~~-~p-----------Tig~~~~~i-----------------~~~ 42 (159)
T cd04159 2 ITLVGLQNSGKTTLVNVIAG-----GQFSE-----DT-IP-----------TVGFNMRKV-----------------TKG 42 (159)
T ss_pred EEEECCCCCCHHHHHHHHHC-----CCCCC-----CC-CC-----------CCCEEEEEE-----------------EEC
T ss_conf 89999999869999999975-----99988-----61-67-----------325058999-----------------989
Q ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHH
Q ss_conf 5886998334422211246899999985138511000310111225688889
Q gi|254780711|r 183 GYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDAVHLAR 234 (461)
Q Consensus 183 ~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a~~~a~ 234 (461)
T Consensus 43 ~~~l~iwDt~G~e~-----~~~l~~~y-~~~~~~ii~V~D~sd-~~s~~~~~ 87 (159)
T cd04159 43 NVTLKVWDLGGQPR-----FRSMWERY-CRGVNAIVYVVDAAD-RTALEAAK 87 (159)
T ss_pred CEEEEEEECCCHHH-----HHHHHHHH-HCCCCEEEECCCCCC-HHHHHHHH
T ss_conf 99999997983587-----79999987-468636875157787-88999999