HHsearch alignment for GI: 254780711 and conserved domain: cd04159

>cd04159 Arl10_like Arl10-like subfamily. Arl9/Arl10 was identified from a human cancer-derived EST dataset. No functional information about the subfamily is available at the current time, but crystal structures of human Arl10b and Arl10c have been solved.
Probab=95.63  E-value=0.056  Score=35.31  Aligned_cols=86  Identities=30%  Similarity=0.364  Sum_probs=44.9

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             99623443334688999999998614895078205422100477999985103474222332103689999999999741
Q gi|254780711|r  103 IMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSARDG  182 (461)
Q Consensus       103 IllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~a~~~  182 (461)
T Consensus         2 I~llG~~~~GKTsll~~~~~-----~~f~~-----~~-~p-----------Tig~~~~~i-----------------~~~   42 (159)
T cd04159           2 ITLVGLQNSGKTTLVNVIAG-----GQFSE-----DT-IP-----------TVGFNMRKV-----------------TKG   42 (159)
T ss_pred             EEEECCCCCCHHHHHHHHHC-----CCCCC-----CC-CC-----------CCCEEEEEE-----------------EEC
T ss_conf             89999999869999999975-----99988-----61-67-----------325058999-----------------989


Q ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHH
Q ss_conf             5886998334422211246899999985138511000310111225688889
Q gi|254780711|r  183 GYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDAVHLAR  234 (461)
Q Consensus       183 ~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a~~~a~  234 (461)
T Consensus        43 ~~~l~iwDt~G~e~-----~~~l~~~y-~~~~~~ii~V~D~sd-~~s~~~~~   87 (159)
T cd04159          43 NVTLKVWDLGGQPR-----FRSMWERY-CRGVNAIVYVVDAAD-RTALEAAK   87 (159)
T ss_pred             CEEEEEEECCCHHH-----HHHHHHHH-HCCCCEEEECCCCCC-HHHHHHHH
T ss_conf             99999997983587-----79999987-468636875157787-88999999