HHsearch alignment for GI: 254780711 and conserved domain: cd04160

>cd04160 Arfrp1 Arfrp1 subfamily. Arfrp1 (Arf-related protein 1), formerly known as ARP, is a membrane-associated Arf family member that lacks the N-terminal myristoylation motif. Arfrp1 is mainly associated with the trans-Golgi compartment and the trans-Golgi network, where it regulates the targeting of Arl1 and the GRIP domain-containing proteins, golgin-97 and golgin-245, onto Golgi membranes. It is also involved in the anterograde transport of the vesicular stomatitis virus G protein from the Golgi to the plasma membrane, and in the retrograde transport of TGN38 and Shiga toxin from endosomes to the trans-Golgi network. Arfrp1 also inhibits Arf/Sec7-dependent activation of phospholipase D. Deletion of Arfrp1 in mice causes embryonic lethality at the gastrulation stage and apoptosis of mesodermal cells, indicating its importance in development.
Probab=96.77  E-value=0.0046  Score=43.61  Aligned_cols=96  Identities=16%  Similarity=0.249  Sum_probs=49.4

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             99623443334688999999998614895078205422100477999985103474222332103689999999999741
Q gi|254780711|r  103 IMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSARDG  182 (461)
Q Consensus       103 IllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~a~~~  182 (461)
T Consensus         2 ivilG~~~~GKTsll~~l~~~~~~~~~-----~~~~~~~-----------~Tvg~~~~~-----------------i~~~   48 (167)
T cd04160           2 VLILGLDNAGKTTFLEQLKTLFSKYKG-----LPPSKIT-----------PTVGLNIGT-----------------IEVG   48 (167)
T ss_pred             EEEECCCCCCHHHHHHHHHHCCCCCCC-----CCCCCCC-----------CCCCEEEEE-----------------EEEC
T ss_conf             999999998888999988750367677-----7655403-----------531326899-----------------9989


Q ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHH-HHHHH
Q ss_conf             588699833442221124689999998513851100031011122568888-98876
Q gi|254780711|r  183 GYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDAVHLA-RNFDK  238 (461)
Q Consensus       183 ~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a~~~a-~~F~~  238 (461)
T Consensus        49 ~~~l~iwD~~Gqe-----~~~~l~~~y~-~~a~~ii~VvD~sd-~~~~~~~~~~l~~   98 (167)
T cd04160          49 NARLKFWDLGGQE-----SLRSLWDKYY-AECHAIIYVIDSTD-RERFEESKSALEK   98 (167)
T ss_pred             CEEEEEEECCCCH-----HHHHHHHHHC-CCCCEEEEEEECCC-HHHHHHHHHHHHH
T ss_conf             9999999689878-----8878998742-89878999986686-7889999999999