HHsearch alignment for GI: 254780711 and conserved domain: cd04165

>cd04165 GTPBP1_like GTPBP1-like. Mammalian GTP binding protein 1 (GTPBP1), GTPBP2, and nematode homologs AGP-1 and CGP-1 are GTPases whose specific functions remain unknown. In mouse, GTPBP1 is expressed in macrophages, in smooth muscle cells of various tissues and in some neurons of the cerebral cortex; GTPBP2 tissue distribution appears to overlap that of GTPBP1. In human leukemia and macrophage cell lines, expression of both GTPBP1 and GTPBP2 is enhanced by interferon-gamma (IFN-gamma). The chromosomal location of both genes has been identified in humans, with GTPBP1 located in chromosome 22q12-13.1 and GTPBP2 located in chromosome 6p21-12. Human glioblastoma multiforme (GBM), a highly-malignant astrocytic glioma and the most common cancer in the central nervous system, has been linked to chromosomal deletions and a translocation on chromosome 6. The GBM translocation results in a fusion of GTPBP2 and PTPRZ1, a protein involved in oligodendrocyte differentiation, recovery, and
Probab=97.22  E-value=0.0015  Score=47.20  Aligned_cols=69  Identities=17%  Similarity=0.208  Sum_probs=41.0

Q ss_pred             HHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCH-----HHHHHHHHHHHHCCCCCEEEEECCCC
Q ss_conf             9741588699833442221124689999998513851100031011122-----56888898876358440776411576
Q gi|254780711|r  179 ARDGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQ-----DAVHLARNFDKIVDLTGIILTRMDGD  253 (461)
Q Consensus       179 a~~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq-----~a~~~a~~F~~~~~i~giIlTKlD~~  253 (461)
T Consensus        79 ~~~~~k~it~iD~pGH~~y~kt~i~----G~~~~~~d~~~LvV~A~~G~~~~T~ehl~l~~~l~--ip~-~vvitKiDl~  151 (224)
T cd04165          79 CEKSSKLVTFIDLAGHERYLKTTLF----GLTGYAPDYAMLVVAANAGIIGMTKEHLGLALALN--IPV-FVVVTKIDLA  151 (224)
T ss_pred             ECCCCCEEEEEECCCHHHHHHHHHH----HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHC--CCE-EEEEECCCCC
T ss_conf             1367867999978873999999998----76355689899993178897799999999999839--998-9999897768


Q ss_pred             C
Q ss_conf             6
Q gi|254780711|r  254 G  254 (461)
Q Consensus       254 a  254 (461)
T Consensus       152 ~  152 (224)
T cd04165         152 P  152 (224)
T ss_pred             C
T ss_conf             9