HHsearch alignment for GI: 254780711 and conserved domain: pfam00270

>pfam00270 DEAD DEAD/DEAH box helicase. Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.
Probab=96.01  E-value=0.14  Score=32.33  Aligned_cols=88  Identities=20%  Similarity=0.202  Sum_probs=41.7

Q ss_pred             EEEECCCCCCHHHHHHHHH-HHHHHHCCCCEEEECCCCCCCHHHHHHHHHHH---CCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             9962344333468899999-99986148950782054221004779999851---0347422233210368999999999
Q gi|254780711|r  103 IMLVGLQGSGKTTTTAKIA-YHLKTLKKKKILMASLDVHRPAAQEQLRYLGE---QIQVDTLEVIPEQSPEKIAIRATQS  178 (461)
Q Consensus       103 IllvGl~GsGKTTT~aKLA-~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~---~~~v~~~~~~~~~dp~~i~~~a~~~  178 (461)
T Consensus        17 ~iv~~pTGsGKT~~~~~~~l~~~~~~~~~~~~v~l~P-t~aL~~q~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~--   92 (167)
T pfam00270        17 VLVQAPTGSGKTLAFLLPALQALLKNPDGPQALVLAP-TRELAEQIYEELKKLGKYLGLKVALLYGGDSPKEQ-LRKL--   92 (167)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC-HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHH-HHHH--
T ss_conf             8998899975899999999999874778987999906-08888899988643210267640464178617889-8764--


Q ss_pred             HHHCCCCEEEEECCCCCCC
Q ss_conf             9741588699833442221
Q gi|254780711|r  179 ARDGGYDAVILDTAGRNHI  197 (461)
Q Consensus       179 a~~~~~D~iiiDTaGR~~~  197 (461)
T Consensus        93 --~~~~~-Ilv~Tp~~l~~  108 (167)
T pfam00270        93 --KKGPD-ILVGTPGRLLD  108 (167)
T ss_pred             --CCCCC-EEEECHHHHHH
T ss_conf             --05770-79947899999