HHsearch alignment for GI: 254780711 and conserved domain: pfam08433

>pfam08433 KTI12 Chromatin associated protein KTI12. This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II. The Elongator complex has histone acetyltransferase activity.

Probab=97.70  E-value=0.00075  Score=49.58  Aligned_cols=115  Identities=18%  Similarity=0.164  Sum_probs=74.1

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             99623443334688999999998614895078205422100477999985103474222332103689999999999741
Q gi|254780711|r  103 IMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSARDG  182 (461)
Q Consensus       103 IllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~a~~~  182 (461)
T Consensus         2 ivl~G~P~SGKSt~A~~L~~~l~~-~~~~v~vi~d~~~~~~~------------~~y~~s~~Ek~~R~~l~s~v~r~Ls~   68 (266)
T pfam08433         2 IILTGLPSSGKSTRAKELAKYLEE-KGYDVIVISDESLGIES------------DDYKDSKKEKFLRGSLRSAVKRDLSK   68 (266)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHH-CCCEEEEECCCCCCCCC------------CCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf             798579999688999999999997-59938997800126753------------10001047899999999999875166


Q ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHH
Q ss_conf             588699833442221124689999998513851100031011122568888988763
Q gi|254780711|r  183 GYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDAVHLARNFDKI  239 (461)
Q Consensus       183 ~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a~~~a~~F~~~  239 (461)
T Consensus        69 -~~iVIlD~---~NYiKG~RYEL~C~Ak~~~t~~c~v~~~~-----p~e~~~~~N~~  116 (266)
T pfam08433        69 -NTIVIVDS---LNYIKGFRYELYCIAKEAKTTYCVVYCKA-----PLDTCLKWNEE  116 (266)
T ss_pred             -CCEEEECC---CCCHHHHHHHHHHHHHHCCCCEEEEEECC-----CHHHHHHHHCC
T ss_conf             -88899548---74045689999999986388848999689-----98999986214