RPSBLAST alignment for GI: 254780711 and conserved domain: PRK00771

>gnl|CDD|179118 PRK00771, PRK00771, signal recognition particle protein Srp54; Provisional. Length = 437
 Score =  420 bits (1082), Expect = e-118
 Identities = 176/444 (39%), Positives = 269/444 (60%), Gaps = 9/444 (2%)

Query: 5   LQERLGSIFQNITGKGSLSETDISNTLREIRRTFLEADVSLEVVQSFSKRVQEKAKGEKI 64
           L E L    + + GK  + E  +   +++I+R  L+ADV++++V+  SK ++E+A  E+ 
Sbjct: 1   LGESLRDALKKLAGKSRIDEKTVKEVVKDIQRALLQADVNVKLVKELSKSIKERALEEEP 60

Query: 65  LRSIQPGQMVIKIVHDELVEVLGKESIELDLNAPSPLVIMLVGLQGSGKTTTTAKIAYHL 124
            + + P + VIKIV++ELV++LG+E+ E  +    P  IMLVGLQGSGKTTT AK+A + 
Sbjct: 61  PKGLTPREHVIKIVYEELVKLLGEET-EPLVLPLKPQTIMLVGLQGSGKTTTAAKLARYF 119

Query: 125 KTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSARDGGY 184
           K    K  L+A+ D +RPAA +QL+ L E+I V        +   +IA    +  +    
Sbjct: 120 KKKGLKVGLVAA-DTYRPAAYDQLKQLAEKIGVPFYGDPDNKDAVEIAKEGLEKFKK--A 176

Query: 185 DAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDAVHLARNFDKIVDLTG 244
           D +I+DTAGR+ + + L++E+ EIK    P E+LLV DA  GQ A + A+ F + V + G
Sbjct: 177 DVIIVDTAGRHALEEDLIEEMKEIKEAVKPDEVLLVIDATIGQQAKNQAKAFHEAVGIGG 236

Query: 245 IILTRMDGDGRGGAALSMRTVTGKPIKAIGTGEKINDLENFFPDRIANRILGMGDVVSLV 304
           II+T++DG  +GG ALS    TG PIK IGTGEKI+DLE F PDR  +R+LGMGD+ SL+
Sbjct: 237 IIITKLDGTAKGGGALSAVAETGAPIKFIGTGEKIDDLERFDPDRFISRLLGMGDLESLL 296

Query: 305 EKAARNLNEKQAALTAKKIAKGKFDLEDLAEQFRQTQKIGGIGSILRMLPGM-PSLKQNI 363
           EK    L+E++     +K+ KGKF L+D+ +Q     K+G +  IL+MLPG+   L    
Sbjct: 297 EKVEEALDEEEEEKDVEKMMKGKFTLKDMYKQLEAMNKMGPLKQILQMLPGLGGKLPDEA 356

Query: 364 MPSSFDDKTINHHIAIIASMTKEERANPSIIKHSRKKRIAAGSGTNAAKINKLLKLHRQV 423
           +  +  ++ +  + AI+ SMT+EE  NP II  SR +RIA GSGT    + +LLK ++ +
Sbjct: 357 LEVT--EEKLKKYKAIMDSMTEEELENPEIINASRIRRIARGSGTTVEDVRELLKYYKMM 414

Query: 424 AEMMHSTQGLGGNALTQQIMGRLK 447
            + M   +   G     ++M +  
Sbjct: 415 KKAMKQLKKGKGK--MGKLMKQFG 436