RPSBLAST alignment for GI: 254780711 and conserved domain: PRK00771
>gnl|CDD|179118 PRK00771, PRK00771, signal recognition particle protein Srp54; Provisional. Length = 437
Score = 420 bits (1082), Expect = e-118
Identities = 176/444 (39%), Positives = 269/444 (60%), Gaps = 9/444 (2%)
Query: 5 LQERLGSIFQNITGKGSLSETDISNTLREIRRTFLEADVSLEVVQSFSKRVQEKAKGEKI 64
L E L + + GK + E + +++I+R L+ADV++++V+ SK ++E+A E+
Sbjct: 1 LGESLRDALKKLAGKSRIDEKTVKEVVKDIQRALLQADVNVKLVKELSKSIKERALEEEP 60
Query: 65 LRSIQPGQMVIKIVHDELVEVLGKESIELDLNAPSPLVIMLVGLQGSGKTTTTAKIAYHL 124
+ + P + VIKIV++ELV++LG+E+ E + P IMLVGLQGSGKTTT AK+A +
Sbjct: 61 PKGLTPREHVIKIVYEELVKLLGEET-EPLVLPLKPQTIMLVGLQGSGKTTTAAKLARYF 119
Query: 125 KTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSARDGGY 184
K K L+A+ D +RPAA +QL+ L E+I V + +IA + +
Sbjct: 120 KKKGLKVGLVAA-DTYRPAAYDQLKQLAEKIGVPFYGDPDNKDAVEIAKEGLEKFKK--A 176
Query: 185 DAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDAVHLARNFDKIVDLTG 244
D +I+DTAGR+ + + L++E+ EIK P E+LLV DA GQ A + A+ F + V + G
Sbjct: 177 DVIIVDTAGRHALEEDLIEEMKEIKEAVKPDEVLLVIDATIGQQAKNQAKAFHEAVGIGG 236
Query: 245 IILTRMDGDGRGGAALSMRTVTGKPIKAIGTGEKINDLENFFPDRIANRILGMGDVVSLV 304
II+T++DG +GG ALS TG PIK IGTGEKI+DLE F PDR +R+LGMGD+ SL+
Sbjct: 237 IIITKLDGTAKGGGALSAVAETGAPIKFIGTGEKIDDLERFDPDRFISRLLGMGDLESLL 296
Query: 305 EKAARNLNEKQAALTAKKIAKGKFDLEDLAEQFRQTQKIGGIGSILRMLPGM-PSLKQNI 363
EK L+E++ +K+ KGKF L+D+ +Q K+G + IL+MLPG+ L
Sbjct: 297 EKVEEALDEEEEEKDVEKMMKGKFTLKDMYKQLEAMNKMGPLKQILQMLPGLGGKLPDEA 356
Query: 364 MPSSFDDKTINHHIAIIASMTKEERANPSIIKHSRKKRIAAGSGTNAAKINKLLKLHRQV 423
+ + ++ + + AI+ SMT+EE NP II SR +RIA GSGT + +LLK ++ +
Sbjct: 357 LEVT--EEKLKKYKAIMDSMTEEELENPEIINASRIRRIARGSGTTVEDVRELLKYYKMM 414
Query: 424 AEMMHSTQGLGGNALTQQIMGRLK 447
+ M + G ++M +
Sbjct: 415 KKAMKQLKKGKGK--MGKLMKQFG 436