RPSBLAST alignment for GI: 254780711 and conserved domain: PRK12727

>gnl|CDD|183705 PRK12727, PRK12727, flagellar biosynthesis regulator FlhF; Provisional. Length = 559
 Score = 59.6 bits (144), Expect = 2e-09
 Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 12/202 (5%)

Query: 85  VLGKESIELDLNAPSPL----VIMLVGLQGSGKTTTTAKIAYH-LKTLKKKKILMASLDV 139
           +LG  S  L +    PL    VI LVG  G+GKTTT AK+A         + + + + D 
Sbjct: 331 MLGLLSKRLPVAPVDPLERGGVIALVGPTGAGKTTTIAKLAQRFAAQHAPRDVALVTTDT 390

Query: 140 HRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSARDGGYDAVILDTAGRNHIND 199
            R   +EQL   G Q+ +   E    +S   +  R     RD  Y  V++DTAG    + 
Sbjct: 391 QRVGGREQLHSYGRQLGIAVHEADSAESLLDLLER----LRD--YKLVLIDTAGMGQRDR 444

Query: 200 SLMQEISEIKSLTNPHEILLVADALTGQDAVHLARNFDKIVDLTGIILTRMDGDGRGGAA 259
           +L  +++ +++      +L++       D   + R F       G++LT++D  GR G+A
Sbjct: 445 ALAAQLNWLRAARQVTSLLVLPANAHFSDLDEVVRRFAH-AKPQGVVLTKLDETGRFGSA 503

Query: 260 LSMRTVTGKPIKAIGTGEKIND 281
           LS+      PI  +  G+++ D
Sbjct: 504 LSVVVDHQMPITWVTDGQRVPD 525