RPSBLAST alignment for GI: 254780711 and conserved domain: COG0552
>gnl|CDD|30898 COG0552, FtsY, Signal recognition particle GTPase [Intracellular trafficking and secretion]. Length = 340
Score = 212 bits (542), Expect = 1e-55
Identities = 107/312 (34%), Positives = 162/312 (51%), Gaps = 20/312 (6%)
Query: 1 MFDNLQERLGSIFQNITGK------GSLSETDISNTLREIRRTFLEADVSLEVVQSFSKR 54
F+ L++ L +N + E + L E+ +EADV +E + +
Sbjct: 33 WFERLKQGLSKTKKNFGKGIKGLFLKKIKEKLDEDLLEELEELLIEADVGVETAEEIIEE 92
Query: 55 VQEKAKGEKILRSIQPGQMVIKIVHDELVEVLGK----ESIELDLNAPSPLVIMLVGLQG 110
++ K E + I+ + V + + + L+E+L + P VI+ VG+ G
Sbjct: 93 LR---KREGKKKKIKDEETVKEALREALIEILRPVDKVDLPLEIPKEKKPFVILFVGVNG 149
Query: 111 SGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEK 170
GKTTT AK+A +LK + K +L+A+ D R AA EQL GE++ V + P
Sbjct: 150 VGKTTTIAKLAKYLKQ-QGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADPAA 208
Query: 171 IAIRATQSARDGGYDAVILDTAGRNHINDSLMQEISEIKSLTN------PHEILLVADAL 224
+A A Q+A+ G D V++DTAGR H +LM E+ +I + PHEILLV DA
Sbjct: 209 VAFDAIQAAKARGIDVVLIDTAGRLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDAT 268
Query: 225 TGQDAVHLARNFDKIVDLTGIILTRMDGDGRGGAALSMRTVTGKPIKAIGTGEKINDLEN 284
TGQ+A+ A+ F++ V L GIILT++DG +GG LS+ G PIK IG GE +DL
Sbjct: 269 TGQNALSQAKIFNEAVGLDGIILTKLDGTAKGGIILSIAYELGIPIKFIGVGEGYDDLRP 328
Query: 285 FFPDRIANRILG 296
F + + +LG
Sbjct: 329 FDAEWFVDALLG 340