HHsearch alignment for GI: 254780712 and conserved domain: CHL00005

Probab=100.00  E-value=6.5e-36  Score=240.34  Aligned_cols=80  Identities=35%  Similarity=0.530  Sum_probs=75.5

Q ss_pred             CCHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEECHHHHHHHHHCCCCCCHHHHHHHHHCC
Q ss_conf             30141230668788827999920678776841022212156787888644797399999998419835689999999729
Q gi|254780712|r    2 TLKIRLACGGSKSRHHYRIVVANSRSPRDGKFIEKLGTWNPTLPKENPLRFTMNFERIQHWMSKGAQPTDRILFFLDKAG   81 (116)
Q Consensus         2 ~vkIRL~r~G~k~rp~yrIVvadsr~~Rdgk~iE~lG~YnP~~~k~~~~~i~l~~eRi~yWL~~GAqpS~~V~~LL~~~G   81 (116)
T Consensus         1 MVkIRL~R~G~kk~P~YrIVv~dsr~~RdGk~iE~lG~YnP~~-----~~~~l~~eri~~Wl~~GAqpT~tV~~Llk~~g   75 (82)
T CHL00005          1 MVKLRLKRCGRKQQAVYRIVAIDVRSRREGRDLRKVGFYDPIK-----NQTYLNVPAILYFLEKGAQPTGTVYDILKKAE   75 (82)
T ss_pred             CEEEECCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC-----CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCC
T ss_conf             9178301289888982689987357778998536777757999-----86533899999999976988899999999837


Q ss_pred             CCCCC
Q ss_conf             86668
Q gi|254780712|r   82 LIKRS   86 (116)
Q Consensus        82 l~~~~   86 (116)
T Consensus        76 i~~~~   80 (82)
T CHL00005         76 VFKEL   80 (82)
T ss_pred             CHHHH
T ss_conf             37765