HHsearch alignment for GI: 254780712 and conserved domain: COG0228
>COG0228 RpsP Ribosomal protein S16 [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=8.1e-36 Score=239.73 Aligned_cols=78 Identities=60% Similarity=0.961 Sum_probs=75.6
Q ss_pred CCHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEECHHHHHHHHHCCCCCCHHHHHHHHHCC
Q ss_conf 30141230668788827999920678776841022212156787888644797399999998419835689999999729
Q gi|254780712|r 2 TLKIRLACGGSKSRHHYRIVVANSRSPRDGKFIEKLGTWNPTLPKENPLRFTMNFERIQHWMSKGAQPTDRILFFLDKAG 81 (116)
Q Consensus 2 ~vkIRL~r~G~k~rp~yrIVvadsr~~Rdgk~iE~lG~YnP~~~k~~~~~i~l~~eRi~yWL~~GAqpS~~V~~LL~~~G 81 (116)
T Consensus 1 ~vkIRL~R~G~kk~P~YrIVVaDsrs~RDGr~IE~lG~ynP~~--~~~~~v~l~~eri~~Wl~~GAqpSdtV~~ll~~~g 78 (87)
T COG0228 1 MVKIRLARGGSKKRPFYRIVVADSRSPRDGRFIERLGTYNPLL--GKEERVKLDEERILYWLSQGAQPSDTVRRLLKKAG 78 (87)
T ss_pred CEEEEHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHCCCCCCC--CCCCEEEECHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 9078530178766984799984168888986445400237887--87634788699999999859974489999999852