HHsearch alignment of GI: 254780712 and MMDB domain: 3bn0_A_
>3bn0_A (A:) 30S ribosomal protein S16; ribonucleoprotein, ribosome; 2.00A {Aquifex aeolicus}
Probab=100.00 E-value=2.3e-39 Score=261.01 Aligned_cols=95 Identities=34% Similarity=0.582 Sum_probs=84.8
Q ss_pred CCCHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEECHHHHHHHHHCCCCCCHHHHHHHHHC
Q ss_conf 93014123066878882799992067877684102221215678788864479739999999841983568999999972
Q gi|254780712|r 1 MTLKIRLACGGSKSRHHYRIVVANSRSPRDGKFIEKLGTWNPTLPKENPLRFTMNFERIQHWMSKGAQPTDRILFFLDKA 80 (116)
Q Consensus 1 M~vkIRL~r~G~k~rp~yrIVvadsr~~Rdgk~iE~lG~YnP~~~k~~~~~i~l~~eRi~yWL~~GAqpS~~V~~LL~~~ 80 (116)
|+|+|||+|+||||+|||||||+|+|++|||+|||+||||||+ +++.+.||+||++|||++|||||++|..||+++
T Consensus 1 MavkIRL~r~G~k~~pfYrIVv~d~r~~rdgk~iE~iG~YdP~----~~k~~~l~~~ri~~Wl~~GAqpt~~V~~ll~~~ 76 (112)
T 3bn0_A 1 MAVRIRLAKFGRKHHPIYRIVVMDAKSPREGKYIDILGTYDPK----RKVLINVYPEKVKEWVLKGVELSHRAKAILWNH 76 (112)
T ss_dssp -CEEEEEEEEEETTEEEEEEEEEECC------CSEEEEEEETT----TTEEEEECHHHHHHHHHTTCEEEHHHHHHHHHT
T ss_pred CCEEEEHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCC----CCCCEEECHHHHHHHHHCCCCCCHHHHHHHHHC
T ss_conf 9688712008988898578998645777889742035562799----975423689999999997498479999999976
Q ss_pred CCCCC-CCCCCCHHHHHHHH
Q ss_conf 98666-80005112254288
Q gi|254780712|r 81 GLIKR-SPQNNPKKSQPKKK 99 (116)
Q Consensus 81 Gl~~~-~~~~~~~~~~~~kk 99 (116)
|+++. ++.....+....+.
T Consensus 77 gi~~~~~~~~~~~~~~~~~~ 96 (112)
T 3bn0_A 77 GILKEVVPEGYEMKRVGDYY 96 (112)
T ss_dssp THHHHHCCTTEEEEEETTEE
T ss_pred CCCCCCCCCCCCCCCCCHHH
T ss_conf 97400044555634434132