HHsearch results for GI: 254780712 and protein with PDBid: 3mr8_P
>3mr8_P 30S ribosomal protein S16; ribosome, termination, RF1, amber, STOP UAG; 3.62A {Thermus thermophilus} PDB: 1pnx_P 1voq_P 1vos_P 1vov_P 1vox_P 1voz_P 1pns_P 3ms0_P 3fic_P* 1emw_A 1fjg_P* 1hnw_P* 1hnx_P* 1hnz_P* 1hr0_P 1i94_P* 1i95_P* 1i96_P* 1i97_P* 1ibk_P* ...
Probab=100.00 E-value=1.2e-36 Score=243.45 Aligned_cols=82 Identities=46% Similarity=0.774 Sum_probs=78.4
Q ss_pred CCHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEECHHHHHHHHHCCCCCCHHHHHHHHHCC
Q ss_conf 30141230668788827999920678776841022212156787888644797399999998419835689999999729
Q gi|254780712|r 2 TLKIRLACGGSKSRHHYRIVVANSRSPRDGKFIEKLGTWNPTLPKENPLRFTMNFERIQHWMSKGAQPTDRILFFLDKAG 81 (116)
Q Consensus 2 ~vkIRL~r~G~k~rp~yrIVvadsr~~Rdgk~iE~lG~YnP~~~k~~~~~i~l~~eRi~yWL~~GAqpS~~V~~LL~~~G 81 (116)
||+|||+|+||||+|||||||+|+|++|||+|||+||||||+. .+++.+.||.||++|||++|||||++|.+||+++|
T Consensus 1 MvkIRL~R~G~k~~P~YrIVv~d~r~~rdgk~iE~lG~YnP~~--~~~~~i~i~~eRi~~WL~~GAqpS~~V~~Ll~~~g 78 (83)
T 3mr8_P 1 MVKIRLARFGSKHNPHYRIVVTDARRKRDGKYIEKIGYYDPRK--TTPDWLKVDVERARYWLSVGAQPTDTARRLLRQAG 78 (83)
T ss_dssp CEEEEECCCSSTTCCCCCEEEEETTSCTTSCCSEECEEECTTC--CSTTSEEECHHHHHHHHHTCCCCCHHHHHHHHHHT
T ss_pred CEEEECCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC--CCCCEEEECHHHHHHHHHCCCCCCHHHHHHHHHCC
T ss_conf 9288212489989986899997668788996467888889998--88501564699999999878906789999999838
Q ss_pred CCCC
Q ss_conf 8666
Q gi|254780712|r 82 LIKR 85 (116)
Q Consensus 82 l~~~ 85 (116)
+++.
T Consensus 79 i~~~ 82 (83)
T 3mr8_P 79 VFRQ 82 (83)
T ss_dssp SSCC
T ss_pred CCCC
T ss_conf 8567